@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4280: (2016-02-25 )
MQTLLKLLQDGRFHSGEELGAVLGISRSAVWKRLQHLEAEHGLQFHKVRGRGYRLASPLSLLDPRKIDSLWPVEIMPTVDSTNSEAMRRLAAGASTPFVIVAEQQTAGRGRRGRAWVSPYGENLYYSLAITVRGGARELEGLSLVVGLAVLRALESLGVQDTGLKWPNDLLQGGKKIAGILLELSGDPADLCHVVIGIGINVNMKTATDIGQPWTSLREALGELVDRSRLLSALNRQLADYLDRHSREGFAASREEWESCNLWQGAQVILSTALSSIEGRVLGVDSRGALRLEVDGVEQGFSGGELSLRLRQ

Atome Classification :

(73 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

44L_A_3(4XTY)
?
[Raw transfer]




BT5_A_3(4OP0)
?
[Raw transfer]




44K_A_3(4XTV)
?
[Raw transfer]




BT5_A_3(1WQW)
?
[Raw transfer]




BT5_B_4(4OP0)
?
[Raw transfer]




44R_B_5(4XU3)
?
[Raw transfer]




44O_B_6(4XU1)
?
[Raw transfer]




44N_B_4(4XU0)
?
[Raw transfer]




BTX_C_3(2EWN)
BIRA_ECOLI
[Raw transfer]




590_A_3(4XTX)
?
[Raw transfer]




44Q_B_4(4XU2)
?
[Raw transfer]




BS5_A_3(3RUX)
?
[Raw transfer]




BT5_B_4(2DKG)
?
[Raw transfer]




BT5_B_4(1WQW)
?
[Raw transfer]




44K_B_4(4XTV)
?
[Raw transfer]




44M_B_5(4XTW)
?
[Raw transfer]




594_B_4(4XTZ)
?
[Raw transfer]




BS5_B_4(3RUX)
?
[Raw transfer]




BTX_D_4(2EWN)
BIRA_ECOLI
[Raw transfer]




594_A_3(4XTZ)
?
[Raw transfer]




44L_B_4(4XTY)
?
[Raw transfer]




BT5_B_4(2DKG)
?
[Raw transfer]




44M_A_3(4XTW)
?
[Raw transfer]




BT5_C_3(2DEQ)
?
[Raw transfer]




BT5_B_5(2DTI)
?
[Raw transfer]




BT5_B_3(2DXU)
?
[Raw transfer]




BT5_C_3(2DZ9)
?
[Raw transfer]




BT5_C_3(2DVE)
?
[Raw transfer]




BT5_C_3(2DVE)
?
[Raw transfer]




BTX_B_4(2E41)
?
[Raw transfer]




BT5_A_2(3RIR)
?
[Raw transfer]




44N_A_3(4XU0)
?
[Raw transfer]




BT5_C_3(2DZ9)
?
[Raw transfer]




BT5_C_3(2DEQ)
?
[Raw transfer]




BTX_A_3(2E41)
?
[Raw transfer]




BT5_C_3(2DJZ)
?
[Raw transfer]




BT5_B_5(2DTI)
?
[Raw transfer]




BT5_C_3(2DJZ)
?
[Raw transfer]




ATP_B_5(1X01)
?
[Raw transfer]




ATP_D_4(2DXT)
?
[Raw transfer]




ATP_A_4(1X01)
?
[Raw transfer]




ATP_A_3(3EFS)
?
[Raw transfer]




ATP_C_3(2DXT)
?
[Raw transfer]




ADP_B_4(1WNL)
?
[Raw transfer]




BTN_D_4(1HXD)
BIRA_ECOLI
[Raw transfer]




ATP_B_7(3EFS)
?
[Raw transfer]




BTN_C_3(1HXD)
BIRA_ECOLI
[Raw transfer]




ADP_A_3(1WNL)
?
[Raw transfer]




BTN_B_2(1BIB)
BIRA_ECOLI
[Raw transfer]




BTN_B_7(3EFR)
?
[Raw transfer]




BC4_A_2(4HA8)
?
[Raw transfer]




BTN_A_3(3EFR)
?
[Raw transfer]




ADN_A_6(2EJG)
?
[Raw transfer]




ADN_B_8(2EJG)
?
[Raw transfer]




ADN_A_3(2ZGW)
?
[Raw transfer]




ADN_B_5(2ZGW)
?
[Raw transfer]




ADP_D_4(2DTH)
?
[Raw transfer]




ADN_B_9(2EJF)
?
[Raw transfer]




ADP_C_3(2DTH)
?
[Raw transfer]




ADN_A_7(2EJF)
?
[Raw transfer]




2 PsiBlast_PDB 92.6340% -92 - C6 -2EWN 10.7 BIRA_ECOLI
21 PsiBlast_CBE 91.9940% -91 - C6 -2EWN 11.0 BIRA_ECOLI
1 PsiBlast_PDB 89.0740% -88 - C6 -1HXD 5.6 BIRA_ECOLI
4 PsiBlast_PDB 88.8640% -95 - C6 -1BIB 4.1 BIRA_ECOLI
22 PsiBlast_CBE 88.4440% -87 - C6 -1HXD 5.1 BIRA_ECOLI
3 PsiBlast_PDB 86.8740% -97 - C6 -1BIA - BIRA_ECOLI -
113 HHSearch 86.8440% -99 - C6 -1BIA - BIRA_ECOLI -
10 PsiBlast_PDB 80.6425% -92 - C6 -3RKY - ? -
8 PsiBlast_PDB 80.5625% -95 - C6 -3RKW - ? -
16 PsiBlast_PDB 80.2325% -97 - C6 -3V8K - ? -
7 PsiBlast_PDB 79.9625% -93 - C6 -3RIR 9.3 ?
17 PsiBlast_PDB 79.8325% -93 - C6 -3V8L - ? -
6 PsiBlast_PDB 79.8325% -93 - C6 -4HA8 5.1 ?
11 PsiBlast_PDB 79.7825% -94 - C6 -4DQ2 - ? -
12 PsiBlast_PDB 79.7425% -92 - C6 -3V7C - ? -
14 PsiBlast_PDB 79.5825% -94 - C6 -3V7R - ? -
13 PsiBlast_PDB 79.2025% -97 - C6 -3V7S - ? -
112 HHSearch 78.8324%-101 - C6 -3RKX - ? -
9 PsiBlast_PDB 77.5225%-103 - C6 -3RKX - ? -
15 PsiBlast_PDB 76.8425%-104 - C6 -3V8J - ? -
25 PsiBlast_CBE 72.0532% -86 - C6 -4XU3 9.8 ?
38 PsiBlast_CBE 71.6232% -88 - C6 -4XTX 8.8 ?
24 PsiBlast_CBE 71.5733% -85 - C6 -3EFS 5.6 ?
35 PsiBlast_CBE 71.3832% -84 - C6 -4XTY 7.5 ?
32 PsiBlast_CBE 71.2732% -85 - C6 -4XU0 8.8 ?
19 PsiBlast_PDB 71.1733% -90 - C6 -3EFS 6.9 ?
36 PsiBlast_CBE 71.1532% -83 - C6 -4XTY 8.1 ?
34 PsiBlast_CBE 71.1132% -85 - C6 -4XTZ 8.9 ?
42 PsiBlast_CBE 71.0532% -86 - C6 -4XTV 8.7 ?
31 PsiBlast_CBE 70.8732% -84 - C6 -4XU0 8.6 ?
40 PsiBlast_CBE 70.8332% -85 - C6 -4XTW 10.0 ?
44 PsiBlast_CBE 70.7932% -84 - C6 -3RUX 7.9 ?
27 PsiBlast_CBE 70.7132% -83 - C6 -4XU2 9.2 ?
41 PsiBlast_CBE 70.6732% -81 - C6 -4XTV 7.6 ?
46 PsiBlast_CBE 70.6632% -88 - C6 -4OP0 8.3 ?
39 PsiBlast_CBE 70.5432% -90 - C6 -4XTW 7.6 ?
48 PsiBlast_CBE 69.8133% -78 - C6 -3EFR 1.1 ?
45 PsiBlast_CBE 69.3432% -86 - C6 -4OP0 7.2 ?
29 PsiBlast_CBE 68.9832% -87 - C6 -4XU1 8.0 ?
33 PsiBlast_CBE 68.7332% -85 - C6 -4XTZ 7.1 ?
47 PsiBlast_CBE 68.6333% -74 - C6 -3EFR 0.7 ?
62 PsiBlast_CBE 68.5833%-110 - C6 -2DJZ 8.9 ?
57 PsiBlast_CBE 68.0133%-112 - C6 -1WQW 10.7 ?
72 PsiBlast_CBE 67.8433%-115 - C6 -2DZ9 8.6 ?
70 PsiBlast_CBE 67.8133%-112 - C6 -2DEQ 8.5 ?
65 PsiBlast_CBE 67.7633%-109 - C6 -2EJG 5.1 ?
59 PsiBlast_CBE 67.7433%-109 - C6 -1WNL 7.0 ?
43 PsiBlast_CBE 67.6832% -81 - C6 -3RUX 7.8 ?
74 PsiBlast_CBE 67.4833%-116 - C6 -2DXT 7.2 ?
54 PsiBlast_CBE 67.4433%-112 - C6 -2DKG 8.6 ?
68 PsiBlast_CBE 67.3633%-114 - C6 -2DVE 8.2 ?
67 PsiBlast_CBE 67.2933%-110 - C6 -2DVE 8.5 ?
77 PsiBlast_CBE 67.2432%-108 - C6 -2EJF 4.1 ?
73 PsiBlast_CBE 67.2133%-111 - C6 -2DXT 8.3 ?
56 PsiBlast_CBE 67.1333%-114 - C6 -1X01 6.2 ?
80 PsiBlast_CBE 66.8332%-115 - C6 -2E41 10.3 ?
69 PsiBlast_CBE 66.6833%-106 - C6 -2DEQ 9.0 ?
63 PsiBlast_CBE 66.6633%-113 - C6 -2DJZ 8.3 ?
50 PsiBlast_CBE 66.6233%-114 - C6 -2DTI 8.2 ?
66 PsiBlast_CBE 66.6133%-106 - C6 -2DXU 9.0 ?
79 PsiBlast_CBE 66.5932%-108 - C6 -2E41 11.0 ?
58 PsiBlast_CBE 66.5833%-112 - C6 -1WQW 9.5 ?
71 PsiBlast_CBE 66.5233%-106 - C6 -2DZ9 9.2 ?
60 PsiBlast_CBE 66.5233%-110 - C6 -1WNL 7.7 ?
75 PsiBlast_CBE 66.4032%-112 - C6 -2ZGW 4.7 ?
55 PsiBlast_CBE 66.2333%-107 - C6 -1X01 7.4 ?
53 PsiBlast_CBE 66.1833%-107 - C6 -2DKG 8.9 ?
49 PsiBlast_CBE 66.1733%-111 - C6 -2DTI 8.6 ?
52 PsiBlast_CBE 66.0833%-108 - C6 -2DTH 4.3 ?
78 PsiBlast_CBE 65.9132%-109 - C6 -2EJF 4.4 ?
64 PsiBlast_CBE 65.8633%-107 - C6 -2EJG 4.1 ?
76 PsiBlast_CBE 65.6932%-113 - C6 -2ZGW 4.6 ?
51 PsiBlast_CBE 65.5033%-106 - C6 -2DTH 4.0 ?