@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4356: (2016-02-26 )
MATLFDPIVLGDLELPNRIVMAPLTRCRADEGRVPNALMAEYYAQRADAGLILSEATAVTPMGVGYPDTPGIWSDDQVRGWSNVTKAVHAAGGRIFLQLWHVGRISDPLYLNGELPVAPSAIAAEGHVSLVRPKRPYVTPRALDTEEIADIVEAYRQGAERAKAAGFDGVEIHGANGYLLDQFLQDSTNKRTDRYGGSIENRARLLLEVTDAAISVWGAQRVGVHLAPRADSHDMGDSNRLETFSHVARELGKRGIAFICAREAQADDSIGVALKKAFGGPYIANEQFTLDSANAILAKGDADAVAFGVPFIANPDLVERLRQGAELNPPRPETFYTGGTEGYLDYPTLA

Atome Classification :

(73 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MLA_A_5(3UPW)
?
[Raw transfer]




FMN_X_2(1VYP)
?
[Raw transfer]




FMN_A_2(2ABA)
?
[Raw transfer]




FMN_A_2(3P84)
?
[Raw transfer]




FMN_K_3(3F03)
?
[Raw transfer]




FMN_A_3(3GKA)
?
[Raw transfer]




FMN_B_7(1ICP)
OPR1_SOLLC
[Raw transfer]




FMN_A_2(1GVS)
?
[Raw transfer]




FMN_A_3(2ABB)
?
[Raw transfer]




FMN_B_4(3GKA)
?
[Raw transfer]




FMN_D_4(1ICQ)
OPR1_SOLLC
[Raw transfer]




FMN_A_2(3P7Y)
?
[Raw transfer]




FMN_A_3(1H51)
?
[Raw transfer]




FMN_B_10(4AB4)
?
[Raw transfer]




FMN_C_3(1ICS)
OPR1_SOLLC
[Raw transfer]




FMN_A_6(1ICP)
OPR1_SOLLC
[Raw transfer]




FMN_C_9(4JIC)
?
[Raw transfer]




FMN_B_7(4JIC)
?
[Raw transfer]




FMN_A_2(3P81)
?
[Raw transfer]




FMN_A_2(3P8I)
?
[Raw transfer]




FMN_B_8(4A3U)
?
[Raw transfer]




FMN_A_6(1ICP)
OPR1_SOLLC
[Raw transfer]




FMN_A_2(1GVR)
?
[Raw transfer]




FMN_A_2(3P67)
?
[Raw transfer]




FMN_C_3(2GQA)
?
[Raw transfer]




FMN_B_5(3HGR)
OPR1_SOLLC
[Raw transfer]




FMN_C_3(1ICQ)
OPR1_SOLLC
[Raw transfer]




FMN_D_4(1ICS)
OPR1_SOLLC
[Raw transfer]




FMN_B_6(2HSA)
OPR3_SOLLC
[Raw transfer]




FMN_A_2(3P80)
?
[Raw transfer]




FMN_X_2(1VYS)
?
[Raw transfer]




FMN_A_3(3HGR)
OPR1_SOLLC
[Raw transfer]




FMN_A_3(2HS6)
OPR3_SOLLC
[Raw transfer]




FMN_C_3(2GQ9)
?
[Raw transfer]




FMN_A_2(4AWU)
?
[Raw transfer]




FMN_A_3(3ATY)
?
[Raw transfer]




FMN_A_2(3P62)
?
[Raw transfer]




FMN_D_4(2GOU)
?
[Raw transfer]




FMN_B_4(1Q45)
OPR3_ARATH
[Raw transfer]




FMN_A_3(1Q45)
OPR3_ARATH
[Raw transfer]




FMN_A_7(2HSA)
OPR3_SOLLC
[Raw transfer]




FMN_B_6(2HSA)
OPR3_SOLLC
[Raw transfer]




FMN_E_5(2GQ8)
?
[Raw transfer]




FMN_B_5(2G5W)
OPR3_ARATH
[Raw transfer]




FMN_B_5(3HGS)
OPR3_SOLLC
[Raw transfer]




FMN_A_2(2Q3R)
OPR1_ARATH
[Raw transfer]




FMN_A_3(2G5W)
OPR3_ARATH
[Raw transfer]




FMN_B_4(3ATY)
?
[Raw transfer]




FMN_A_3(2Q3O)
OPR3_ARATH
[Raw transfer]




FMN_A_2(4E2B)
?
[Raw transfer]




FMN_B_5(2HS6)
OPR3_SOLLC
[Raw transfer]




FMN_B_4(3HGO)
OPR3_SOLLC
[Raw transfer]




FMN_A_3(3HGS)
OPR3_SOLLC
[Raw transfer]




FMN_A_3(3HGO)
OPR3_SOLLC
[Raw transfer]




FMN_A_2(1VJI)
OPR1_ARATH
[Raw transfer]




TNL_B_10(4AEO)
?
[Raw transfer]




FMN_B_4(2Q3O)
OPR3_ARATH
[Raw transfer]




FMN_A_2(4B5N)
?
[Raw transfer]




3RN_A_4(3TX9)
OYE1_SACPS
[Raw transfer]




NAD_A_4(3KFT)
?
[Raw transfer]




NAD_B_6(3KFT)
?
[Raw transfer]




4CH_A_4(4AWU)
?
[Raw transfer]




TXD_A_3(2R14)
?
[Raw transfer]




NAD_B_6(3KFT)
?
[Raw transfer]




PGE_A_2(3WJS)
?
[Raw transfer]




1 PsiBlast_PDB 99.4981% -97 - C4 -4AB4 - ? -
2 PsiBlast_PDB 99.3281% -97 - C4 -4AEO - ? -
21 PsiBlast_CBE 98.4781% -95 - C4 -4AEO 3.7 ?
22 PsiBlast_CBE 98.4481% -95 - C4 -4AB4 8.3 ?
23 PsiBlast_CBE 95.4770% -94 - C4 -3GKA 7.6 ?
3 PsiBlast_PDB 94.2670% -94 - C4 -3GKA - ? -
101 HHSearch 93.4670% -91 - C4 -3GKA 8.1 ?
8 PsiBlast_PDB 86.5450% -93 - C4 -3GX9 - ? -
4 PsiBlast_PDB 85.5950% -88 - C4 -2R14 - ? -
105 HHSearch 85.0852% -90 - C4 -2R14 2.5 ?
6 PsiBlast_PDB 84.9948% -88 - C4 -4JIP - ? -
24 PsiBlast_CBE 84.7348% -90 - C4 -4JIC 8.6 ?
7 PsiBlast_PDB 84.6248% -86 - C4 -4JIQ - ? -
25 PsiBlast_CBE 84.3248% -87 - C4 -4JIC 8.2 ?
28 PsiBlast_CBE 83.7945% -89 - C4 -3KFT 3.6 ?
9 PsiBlast_PDB 83.7650% -86 - C4 -1GWJ - ? -
29 PsiBlast_CBE 83.5845% -88 - C4 -3F03 8.3 ?
42 PsiBlast_CBE 83.4845% -87 - C4 -3P8J - ? -
5 PsiBlast_PDB 83.4848% -86 - C4 -4JIC - ? -
40 PsiBlast_CBE 83.4345% -88 - C4 -2ABB 8.0 ?
55 PsiBlast_CBE 83.2642% -89 - C4 -2G5W 6.9 OPR3_ARATH
30 PsiBlast_CBE 83.1945% -86 - C4 -2ABA 8.3 ?
32 PsiBlast_CBE 83.0445% -86 - C4 -1GVS 8.5 ?
34 PsiBlast_CBE 82.9845% -88 - C4 -3P81 8.3 ?
43 PsiBlast_CBE 82.9545% -87 - C4 -1VYS 7.1 ?
37 PsiBlast_CBE 82.9545% -88 - C4 -3P62 7.0 ?
38 PsiBlast_CBE 82.8645% -86 - C4 -3P67 8.1 ?
39 PsiBlast_CBE 82.8345% -88 - C4 -3P8I 8.2 ?
36 PsiBlast_CBE 82.7645% -88 - C4 -3P7Y 8.2 ?
54 PsiBlast_CBE 82.7342% -89 - C4 -2G5W 6.1 OPR3_ARATH
56 PsiBlast_CBE 82.6842% -88 - C4 -1Q45 6.9 OPR3_ARATH
45 PsiBlast_CBE 82.6245% -89 - C4 -1VYP 8.2 ?
44 PsiBlast_CBE 82.5345% -87 - C4 -3P84 8.2 ?
35 PsiBlast_CBE 82.5345% -87 - C4 -3P80 8.3 ?
33 PsiBlast_CBE 82.5145% -86 - C4 -1GVR 8.0 ?
48 PsiBlast_CBE 82.4445% -80 - C4 -2GQ9 4.0 ?
26 PsiBlast_CBE 82.2247% -80 - C4 -4A3U 6.2 ?
53 PsiBlast_CBE 82.2042% -88 - C4 -2Q3O 5.2 OPR3_ARATH
27 PsiBlast_CBE 82.1945% -86 - C4 -3KFT 2.6 ?
31 PsiBlast_CBE 82.1745% -85 - C4 -1H51 8.4 ?
57 PsiBlast_CBE 82.1042% -88 - C4 -1Q45 5.9 OPR3_ARATH
50 PsiBlast_CBE 82.1045% -79 - C4 -2GOU 4.5 ?
49 PsiBlast_CBE 82.0445% -79 - C4 -2GQ8 4.2 ?
47 PsiBlast_CBE 81.9345% -77 - C4 -2GQA 7.3 ?
51 PsiBlast_CBE 81.5345% -96 - C4 -4B5N 8.0 ?
52 PsiBlast_CBE 81.4742% -87 - C4 -2Q3O 5.0 OPR3_ARATH
107 HHSearch 81.3542% -88 - C4 -2HSA 6.3 OPR3_SOLLC
46 PsiBlast_CBE 81.2545% -79 - C4 -4AWU 5.7 ?
59 PsiBlast_CBE 80.6940% -86 - C4 -3HGO 6.3 OPR3_SOLLC
74 PsiBlast_CBE 80.6539% -91 - C4 -1ICQ 7.5 OPR1_SOLLC
58 PsiBlast_CBE 80.3740% -85 - C4 -3HGO 6.4 OPR3_SOLLC
77 PsiBlast_CBE 80.2939% -92 - C4 -1ICP 7.8 OPR1_SOLLC
83 PsiBlast_CBE 80.0841% -83 - C4 -3ATY 8.3 ?
61 PsiBlast_CBE 79.8440% -85 - C4 -3HGS 6.8 OPR3_SOLLC
63 PsiBlast_CBE 79.8240% -84 - C4 -2HSA 6.4 OPR3_SOLLC
62 PsiBlast_CBE 79.7240% -86 - C4 -2HSA 6.2 OPR3_SOLLC
88 PsiBlast_CBE 79.6341% -82 - C4 -4E2B 7.8 ?
76 PsiBlast_CBE 79.5839% -90 - C4 -1ICP 7.6 OPR1_SOLLC
60 PsiBlast_CBE 79.5540% -86 - C4 -3HGS 6.1 OPR3_SOLLC
73 PsiBlast_CBE 79.2739% -89 - C4 -1ICS 8.0 OPR1_SOLLC
65 PsiBlast_CBE 79.2540% -82 - C4 -2HS6 6.4 OPR3_SOLLC
104 HHSearch 79.2441% -81 * C4 *1ICP 7.8 OPR1_SOLLC
72 PsiBlast_CBE 79.2139% -91 - C4 -1ICS 7.9 OPR1_SOLLC
70 PsiBlast_CBE 79.2039% -88 - C4 -3HGR 7.7 OPR1_SOLLC
75 PsiBlast_CBE 79.1839% -88 - C4 -1ICQ 7.7 OPR1_SOLLC
69 PsiBlast_CBE 79.0842% -88 - C4 -1VJI 7.9 OPR1_ARATH
64 PsiBlast_CBE 79.0340% -82 - C4 -2HS6 6.3 OPR3_SOLLC
71 PsiBlast_CBE 78.9439% -89 - C4 -3HGR 7.9 OPR1_SOLLC
82 PsiBlast_CBE 78.9141% -80 - C4 -3ATY 8.0 ?
68 PsiBlast_CBE 78.5642% -89 - C4 -2Q3R 7.0 OPR1_ARATH
10 PsiBlast_PDB 75.4946% -79 - C4 -3WJS 1.7 ?
90 PsiBlast_CBE 72.8537% -73 - C4 -3UPW Error ?
100 PsiBlast_CBE 72.3435% -78 - C4 -3TX9 3.2 OYE1_SACPS