@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4407: (2016-02-27 )
MFELVDNIAQTAVIKVIGVGGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERISEVLEGADMVFITTGMGGGTGTGAAPIIAEVAKEMGILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLLAAFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTVMSEMGMAMMGTGCASGPNRAREATEAAIRNPLLEDVNLQGARGILVNITAGPDLSLGEYSDVGNIIEQFASEHATVKVGTVIDADMRDELHVTVVATGLGARLEKPVKVVDNTVQGSAAQAAAPAQREQQSVNYRDLDRPTVMRNQSHGSAATAAKLNPQDDLDYLDIPAFLRRQAD

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GTP_A_3(3WGM)
FTSZ_STAAM
[Raw transfer]




GTP_B_5(3WGM)
FTSZ_STAAM
[Raw transfer]




GSP_B_4(3WGN)
FTSZ_STAAM
[Raw transfer]




GSP_A_3(3WGN)
FTSZ_STAAM
[Raw transfer]




G2P_A_3(1W5F)
FTSZ_THEMA
[Raw transfer]




G2P_B_5(1W5F)
FTSZ_THEMA
[Raw transfer]




GTP_A_3(1W5B)
FTSZ1_METJA
[Raw transfer]




GTP_A_3(1W5A)
FTSZ1_METJA
[Raw transfer]




GTP_B_4(1W5B)
FTSZ1_METJA
[Raw transfer]




GDP_A_5(1OFU)
FTSZ_PSEAE
[Raw transfer]




GDP_A_5(1OFU)
FTSZ_PSEAE
[Raw transfer]




GTP_B_5(1W5A)
FTSZ1_METJA
[Raw transfer]




GDP_B_6(1OFU)
FTSZ_PSEAE
[Raw transfer]




GDP_A_4(3VO8)
FTSZ_STAAM
[Raw transfer]




GDP_B_6(3VO8)
FTSZ_STAAM
[Raw transfer]




GDP_A_3(3WGK)
FTSZ_STAAM
[Raw transfer]




GDP_A_2(2VAW)
FTSZ_PSEAE
[Raw transfer]




GDP_A_2(2VAW)
FTSZ_PSEAE
[Raw transfer]




GDP_B_4(3WGK)
FTSZ_STAAM
[Raw transfer]




GDP_A_3(3WGL)
FTSZ_STAAM
[Raw transfer]




GSP_A_3(2Q1Y)
FTSZ_MYCTU
[Raw transfer]




GSP_A_3(1RLU)
FTSZ_MYCTU
[Raw transfer]




GDP_D_4(1FSZ)
FTSZ1_METJA
[Raw transfer]




GDP_A_2(2VAP)
FTSZ1_METJA
[Raw transfer]




GDP_A_2(2VAP)
FTSZ1_METJA
[Raw transfer]




GDP_B_4(3WGL)
FTSZ_STAAM
[Raw transfer]




GDP_B_5(4KWE)
FTSZ_MYCTU
[Raw transfer]




GDP_C_6(4KWE)
FTSZ_MYCTU
[Raw transfer]




GDP_A_3(3VOB)
FTSZ_STAAM
[Raw transfer]




GDP_A_4(4KWE)
FTSZ_MYCTU
[Raw transfer]




GDP_C_3(1RQ7)
FTSZ_MYCTU
[Raw transfer]




GSP_A_3(2RHO)
FTSZ_BACSU
[Raw transfer]




GDP_A_2(3VOA)
FTSZ_STAAM
[Raw transfer]




GDP_A_3(2RHL)
FTSZ_BACSU
[Raw transfer]




GDP_A_2(4DXD)
FTSZ_STAAU
[Raw transfer]




GDP_A_2(4M8I)
FTSZ_STAEQ
[Raw transfer]




GDP_B_4(2RHO)
FTSZ_BACSU
[Raw transfer]




GDP_B_4(2RHL)
FTSZ_BACSU
[Raw transfer]




CIT_A_2(2VXY)
FTSZ_BACSU
[Raw transfer]




CIT_A_2(2VXY)
FTSZ_BACSU
[Raw transfer]




CIT_A_3(1RQ2)
FTSZ_MYCTU
[Raw transfer]




GDP_D_4(1FSZ)
?
[Raw transfer]




CIT_A_3(1RQ2)
FTSZ_MYCTU
[Raw transfer]




CIT_A_3(2Q1X)
FTSZ_MYCTU
[Raw transfer]




64 HHSearch 98.53100%-121 - C2 -1OFU 6.4 FTSZ_PSEAE
2 PsiBlast_PDB 98.53100%-121 - C2 -1OFU 6.4 FTSZ_PSEAE
21 PsiBlast_CBE 98.11100%-118 - C2 -1OFU 6.5 FTSZ_PSEAE
61 HHSearch 97.21100%-116 - C2 -2VAW 6.0 FTSZ_PSEAE
1 PsiBlast_PDB 97.21100%-116 - C2 -2VAW 6.0 FTSZ_PSEAE
62 HHSearch 86.4455%-115 - C2 -2VXY 3.3 FTSZ_BACSU
4 PsiBlast_PDB 85.1250%-116 - C2 -2VXY 3.3 FTSZ_BACSU
12 PsiBlast_PDB 85.0153%-113 - C2 -3VO8 6.8 FTSZ_STAAM
30 PsiBlast_CBE 84.6653%-113 - C2 -3VO8 6.5 FTSZ_STAAM
29 PsiBlast_CBE 84.4953%-115 - C2 -3WGN 6.5 FTSZ_STAAM
31 PsiBlast_CBE 84.4253%-112 - C2 -3WGM 8.1 FTSZ_STAAM
13 PsiBlast_PDB 84.4253%-112 - C2 -3WGN 6.4 FTSZ_STAAM
18 PsiBlast_PDB 84.1553%-112 - C2 -3WGM 8.6 FTSZ_STAAM
19 PsiBlast_PDB 84.1152%-111 - C2 -3WGK 6.1 FTSZ_STAAM
32 PsiBlast_CBE 84.0953%-110 - C2 -3WGL 6.1 FTSZ_STAAM
17 PsiBlast_PDB 84.0753%-110 - C2 -3WGL 6.0 FTSZ_STAAM
3 PsiBlast_PDB 84.0550%-118 - C2 -2VAM - FTSZ_BACSU -
33 PsiBlast_CBE 83.5952%-111 - C2 -3WGK 6.1 FTSZ_STAAM
53 PsiBlast_CBE 83.3943%-114 - C2 -2VAP 6.7 FTSZ1_METJA
48 PsiBlast_CBE 83.0043%-108 - C2 -1W5E - FTSZ1_METJA -
57 PsiBlast_CBE 82.8043%-108 - C2 -1W5A 6.9 FTSZ1_METJA
55 PsiBlast_CBE 82.5143%-112 - C2 -1W5B 7.6 FTSZ1_METJA
56 PsiBlast_CBE 82.4843%-110 - C2 -1W5A 6.4 FTSZ1_METJA
54 PsiBlast_CBE 82.3243%-111 - C2 -1W5B 7.3 FTSZ1_METJA
11 PsiBlast_PDB 82.1953%-111 - C2 -4DXD 5.1 FTSZ_STAAU
67 HHSearch 82.1043%-110 - C2 -2VAP 6.7 FTSZ1_METJA
60 PsiBlast_CBE 82.0043%-108 - C2 -1FSZ 5.9 FTSZ1_METJA
16 PsiBlast_PDB 81.7552%-107 - C2 -4M8I 5.8 FTSZ_STAEQ
14 PsiBlast_PDB 81.2853%-105 - C2 -3VOA 5.3 FTSZ_STAAM
63 HHSearch 80.8947%-111 * C2 *1RQ2 3.2 FTSZ_MYCTU
26 PsiBlast_CBE 80.6954%-105 - C2 -2RHO 5.3 FTSZ_BACSU
37 PsiBlast_CBE 80.5251%-110 - C2 -4KWE 5.3 FTSZ_MYCTU
15 PsiBlast_PDB 80.3853%-105 - C2 -3VOB 4.8 FTSZ_STAAM
34 PsiBlast_CBE 80.1951%-106 - C2 -2Q1Y 7.1 FTSZ_MYCTU
42 PsiBlast_CBE 80.1347%-107 - C2 -1W5F 7.6 FTSZ_THEMA
41 PsiBlast_CBE 79.9751%-107 - C2 -1RLU 6.4 FTSZ_MYCTU
8 PsiBlast_PDB 79.7954%-112 - C2 -2RHL 5.4 FTSZ_BACSU
43 PsiBlast_CBE 79.3847%-105 - C2 -1W5F 8.2 FTSZ_THEMA
27 PsiBlast_CBE 79.1454%-104 - C2 -2RHL 5.3 FTSZ_BACSU
9 PsiBlast_PDB 79.0954%-110 - C2 -2RHO 6.0 FTSZ_BACSU
35 PsiBlast_CBE 79.0551%-113 - C2 -4KWE 5.3 FTSZ_MYCTU
36 PsiBlast_CBE 78.8751%-113 - C2 -4KWE 5.4 FTSZ_MYCTU
39 PsiBlast_CBE 78.2551%-108 - C2 -1RQ2 4.0 FTSZ_MYCTU
38 PsiBlast_CBE 78.2051%-109 - C2 -1RQ7 5.7 FTSZ_MYCTU
20 PsiBlast_PDB 78.1951%-110 - C2 -2Q1X 4.0 FTSZ_MYCTU
83 Fugue 63.5644% -91 - C2 -1FSZ Error ?