@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4435: (2016-02-27 )
MTTMIPRTLFSSDHELFRDSVRKFLEQEAVPFHHQWEKDGHVDRALWNKAGEAGMLCSHLPEEYGGMGADFLYSAVVIEEIGRAGLTGIGFSLHSDIAAPYILHYGSEALKRKYLPKLVSGEMVAAIAMTEPGAGSDLQGVKTTAVLDGDEYVINGSKTFITNGFLADLVIVVAKTDPKAGAKGISLFVVEAGTPGFSKGKRLEKVGMKAQDTSELFFQDVRIPRENLLGKDGQGFIYLMQELPQERLTVGIGALASAEAALQWTLDYTRERKAFGKSVADFQNTRFKLAEMATEIQVGRVFVDRCMELHLQGKLDVPTAAMCKYWTTDLQCKVLDECVQLHGGYGFMWEYPVARAWADARVQRIYAGTNEIMKEIIARAL

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COS_A_4(4L1F)
?
[Raw transfer]



CAA_E_5(1JQI)
ACADS_RAT
[Raw transfer]



CO8_A_5(3MDE)
ACADM_PIG
[Raw transfer]



UCC_B_6(4Y9J)
?
[Raw transfer]



FAD_B_7(2PG0)
?
[Raw transfer]



FAD_A_5(2PG0)
?
[Raw transfer]



FAD_A_3(2D29)
?
[Raw transfer]



FAD_A_9(1BUC)
ACDS_MEGEL
[Raw transfer]



FDA_A_20(3OIB)
?
[Raw transfer]



FAD_A_9(1BUC)
ACDS_MEGEL
[Raw transfer]



FAD_A_9(1BUC)
ACDS_MEGEL
[Raw transfer]



FAD_A_3(4L1F)
?
[Raw transfer]



FAO_A_4(3P4T)
?
[Raw transfer]



FAO_A_4(3P4T)
?
[Raw transfer]



FAD_B_11(1BUC)
ACDS_MEGEL
[Raw transfer]



FAO_B_5(3P4T)
?
[Raw transfer]



FAD_B_7(2PG0)
?
[Raw transfer]



UNL_A_5(3SF6)
?
[Raw transfer]



UNL_A_9(3SF6)
?
[Raw transfer]
112 HHSearch 98.6855%-102 - C2 -2PG0 5.5 ?
1 PsiBlast_PDB 97.3254%-101 - C2 -2PG0 9.3 ?
21 PsiBlast_CBE 95.8454%-101 - C2 -2PG0 8.6 ?
115 HHSearch 86.8939% -98 - C2 -3R7K - ? -
125 HHSearch 86.1935% -96 * C2 *2VIG - ACADS_HUMAN -
5 PsiBlast_PDB 85.9139% -94 - C2 -3R7K - ? -
44 PsiBlast_CBE 85.8936% -99 - C2 -4M9A - ? -
9 PsiBlast_PDB 85.6336% -94 - C2 -1JQI - ACADS_RAT -
6 PsiBlast_PDB 85.0336% -98 - C2 -4N5F - ? -
116 HHSearch 84.5236%-100 - C2 -1IVH - IVD_HUMAN -
127 HHSearch 84.4936% -90 - C2 -1UKW - ? -
43 PsiBlast_CBE 84.4036% -97 - C2 -4M9A - ? -
120 HHSearch 84.3430%-102 - C2 -3SWO - ? -
41 PsiBlast_CBE 84.3338% -97 - C2 -3P4T 7.8 ?
103 Fugue 84.1837% -95 - C2 -2Z1Q - ? -
42 PsiBlast_CBE 83.9338% -96 - C2 -3OIB - ? -
31 PsiBlast_CBE 83.7839% -91 - C2 -3R7K - ? -
14 PsiBlast_PDB 83.7536% -96 - C2 -4M9A - ? -
15 PsiBlast_PDB 83.5935% -92 - C2 -2VIG - ACADS_HUMAN -
13 PsiBlast_PDB 83.5738% -96 - C2 -3P4T 8.0 ?
39 PsiBlast_CBE 83.5436% -93 - C2 -1JQI Error ACADS_RAT
2 PsiBlast_PDB 83.3641% -90 - C2 -4L1F 9.4 ?
12 PsiBlast_PDB 83.3238% -97 - C2 -3OIB 3.4 ?
22 PsiBlast_CBE 83.0641% -89 - C2 -4L1F Error ?
126 HHSearch 82.1838% -96 - C2 -3P4T 7.7 ?
128 HHSearch 81.9738% -91 - C2 -1BUC 9.4 ACDS_MEGEL
130 HHSearch 81.6436% -90 - C2 -2D29 8.6 ?
102 Fugue 80.9838% -89 - C2 -1BUC 9.4 ACDS_MEGEL
79 PsiBlast_CBE 80.9739% -92 - C2 -1BUC 9.9 ACDS_MEGEL
117 HHSearch 80.7330%-100 - C2 -3SF6 2.8 ?
80 PsiBlast_CBE 78.8539% -90 - C2 -1BUC 9.4 ACDS_MEGEL
75 PsiBlast_CBE 73.3334% -80 - C2 -3MDE Error ACADM_PIG