@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4444: (2016-02-27 )
MRRTALALPLFLLVSACSSEPTPPPKPAAKPQARTVISPRPVRQSVQPILPLRGDYANNPAAQHFIDRMVSQHGFNRQQLHDLFAQTQRLDWVIRLMDRQAPTYTPPSGPNGAWLRYRKKFVTPGNVQNGVLFWDQYETDLQRASRVYGVPPEIIVGIIGVETRWGRVMGKTRIIDALSTLSFSYPRRAEFFSGELEQFLLQARKEGTDPLALRGSYAGAMGYGQFMPSSFTKYAVDFDGDGHIDLWNPRDAIGSVANYFKQHGWVSGDRVAVPASGRAPSLEDGFKTLYPLDVLASAGLRPQGPLGGHRQASLLRLDMGRNYQYWYGLPNFYVITRYNHSTHYAMAVWELGKEVDRVRHRSVVRQD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BLG_A_4(1D0M)
MLTB_ECOLI
[Raw transfer]




BLG_A_3(1D0L)
MLTB_ECOLI
[Raw transfer]




NAG_A_2(1QUT)
MLTB_ECOLI
[Raw transfer]




GOL_A_4(1QDT)
MLTB_ECOLI
[Raw transfer]




BCN_A_3(1QDR)
MLTB_ECOLI
[Raw transfer]




BCN_A_3(1QUS)
MLTB_ECOLI
[Raw transfer]




BCN_A_3(1QUS)
MLTB_ECOLI
[Raw transfer]




BCN_A_3(1LTM)
MLTB_ECOLI
[Raw transfer]




BCN_A_3(1QUS)
MLTB_ECOLI
[Raw transfer]




SUGAR_A_2(1D0K)
MLTB_ECOLI
[Raw transfer]

-

EDO_A_3(1QDT)
MLTB_ECOLI
[Raw transfer]




DGL_A_6(1D0K)
MLTB_ECOLI
[Raw transfer]




ALA_A_5(1D0K)
MLTB_ECOLI
[Raw transfer]




SUGAR_A_3(1D0K)
MLTB_ECOLI
[Raw transfer]

-

41 Fugue 98.9271%-102 - C3 -1QUS 2.7 MLTB_ECOLI
5 PsiBlast_PDB 98.8373%-106 - C3 -1D0K 5.2 MLTB_ECOLI
6 PsiBlast_PDB 98.7873%-106 - C3 -1D0L 6.0 MLTB_ECOLI
1 PsiBlast_PDB 98.0773%-103 - C3 -1QUS 2.7 MLTB_ECOLI
19 HHSearch 98.0173%-103 - C3 -1QUS 2.7 MLTB_ECOLI
7 PsiBlast_PDB 98.0073%-103 - C3 -1D0M 6.0 MLTB_ECOLI
3 PsiBlast_PDB 97.7173%-102 - C3 -1QDR 2.6 MLTB_ECOLI
2 PsiBlast_PDB 97.5773%-102 - C3 -1QUT 3.4 MLTB_ECOLI
8 PsiBlast_PDB 97.5273%-103 - C3 -1LTM 2.7 MLTB_ECOLI
4 PsiBlast_PDB 97.3773%-101 - C3 -1QDT 2.3 MLTB_ECOLI
9 PsiBlast_PDB 84.5747%-101 - C3 -4ANR - ? -
22 HHSearch 43.1821% -50 - C3 -1GBS - LYG_CYGAT -
20 HHSearch 40.0419% -47 - C3 -3GXR - ? -
23 HHSearch 37.5821% -40 - C3 -1QSA - SLT_ECOLI -
42 Fugue 36.3512% -29 - C3 -3W6B - ? -
44 Fugue 35.8513% -34 - C1 -3F8T - ? -
34 HHSearch 35.8515% -31 - C3 -2Z2F - LYSC2_BOVIN -
49 Fugue 35.5316% -13 - C2 -4O6D - ? -
29 HHSearch 34.7610% -36 - C3 -1YRO - LALBA_MOUSE -
31 HHSearch 34.1013% -45 - C3 -2GV0 - LYSC_PELSI -