@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4587: (2016-02-28 )
MQSSQLLPLGSLLLSFATPLAQADALHDQASALFKPIPEQVTELRGQPISEQQRELGKKLFFDPRLSRSHVLSCNTCHNVGTGGADNVPTSVGHGWQKGPRNSPTVFNAVFNAAQFWDGRAKDLGEQAKGPIQNSVEMHSTPQLVEQTLGSIPEYVDAFRKAFPKAGKPVSFDNMALAIEAYEATLVTPDSPFDLYLKGDDKALDAQQKKGLKAFMDSGCSACHNGINLGGQAYFPFGLVKKPDASVLPSGDKGRFAVTKTQSDEYVFRAAPLRNVALTAPYFHSGQVWELKDAVAIMGNAQLGKQLAPDDVENIVAFLHSLSGKQPRVEYPLLPASTETTPRPAE

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEC_A_3(1EB7)
CCPR_PSEAE
[Raw transfer]




HEC_A_3(1EB7)
CCPR_PSEAE
[Raw transfer]




HEC_A_3(1EB7)
CCPR_PSEAE
[Raw transfer]




HEC_A_4(2VHD)
CCPR_PSEAE
[Raw transfer]




HEC_A_3(1EB7)
CCPR_PSEAE
[Raw transfer]




HEC_A_4(2VHD)
CCPR_PSEAE
[Raw transfer]




HEC_A_3(1EB7)
CCPR_PSEAE
[Raw transfer]




HEC_B_7(2VHD)
CCPR_PSEAE
[Raw transfer]




HEM_B_7(3HQ6)
?
[Raw transfer]




HEM_A_4(3HQ6)
?
[Raw transfer]




HEC_A_4(2C1V)
?
[Raw transfer]




HEM_B_12(3HQ9)
?
[Raw transfer]




HEC_B_9(2C1V)
?
[Raw transfer]




HEC_A_4(4AAL)
?
[Raw transfer]




HEM_A_6(3O5C)
?
[Raw transfer]




HEC_D_24(1ZZH)
?
[Raw transfer]




HEC_B_22(4AAL)
?
[Raw transfer]




HEC_C_22(1ZZH)
?
[Raw transfer]




HEC_A_4(4AAO)
?
[Raw transfer]




HEM_A_6(3O5C)
?
[Raw transfer]




HEM_C_17(1IQC)
CCPR_NITEU
[Raw transfer]




HEC_A_18(1ZZH)
?
[Raw transfer]




HEC_A_3(4AAM)
?
[Raw transfer]




HEM_C_12(3O5C)
?
[Raw transfer]




HEC_B_20(1ZZH)
?
[Raw transfer]




HEM_D_16(3O5C)
?
[Raw transfer]




HEM_B_8(3HQ8)
?
[Raw transfer]




HEC_B_13(4AAO)
?
[Raw transfer]




HEM_A_3(1RZ6)
?
[Raw transfer]




HEM_B_15(1IQC)
CCPR_NITEU
[Raw transfer]




HEM_A_3(1NML)
?
[Raw transfer]




HEM_A_13(1IQC)
CCPR_NITEU
[Raw transfer]




HEM_A_4(1RZ5)
?
[Raw transfer]




HEM_A_13(1IQC)
CCPR_NITEU
[Raw transfer]




HEM_A_3(1NML)
?
[Raw transfer]




HEM_D_19(1IQC)
CCPR_NITEU
[Raw transfer]




HEM_A_3(3HQ7)
?
[Raw transfer]




CIT_A_4(1RZ6)
?
[Raw transfer]




CIT_A_4(1NML)
?
[Raw transfer]




2 PsiBlast_PDB 96.68100% -67 - C2 -2VHD 11.8 CCPR_PSEAE
37 HHSearch 96.52100% -68 - C2 -2VHD 11.8 CCPR_PSEAE
64 Fugue 96.0899% -76 - C2 -1EB7 10.3 CCPR_PSEAE
1 PsiBlast_PDB 96.01100% -76 - C2 -1EB7 10.3 CCPR_PSEAE
21 PsiBlast_CBE 95.60100% -66 - C2 -2VHD 11.8 CCPR_PSEAE
65 Fugue 92.7796% -71 - C2 -1EB7 9.3 CCPR_PSEAE
25 PsiBlast_CBE 87.1160% -68 - C2 -2C1V 11.7 ?
6 PsiBlast_PDB 86.3064% -73 - C2 -1RZ6 11.7 ?
8 PsiBlast_PDB 86.2460% -64 - C2 -2C1V 11.7 ?
4 PsiBlast_PDB 85.9364% -71 - C2 -1NML 11.5 ?
3 PsiBlast_PDB 85.8965% -68 - C2 -3HQ6 8.5 ?
24 PsiBlast_CBE 85.3564% -73 - C2 -3HQ8 9.7 ?
22 PsiBlast_CBE 85.1165% -74 - C2 -3HQ6 9.5 ?
39 HHSearch 84.9965% -72 - C2 -1NML 11.5 ?
5 PsiBlast_PDB 84.8764% -77 - C2 -1RZ5 9.8 ?
23 PsiBlast_CBE 84.0564% -75 - C2 -3HQ9 10.2 ?
29 PsiBlast_CBE 83.5758% -72 - C2 -4AAL 10.7 ?
10 PsiBlast_PDB 82.5158% -69 - C2 -4AAL 10.0 ?
11 PsiBlast_PDB 82.3958% -62 - C2 -4AAM 11.3 ?
7 PsiBlast_PDB 82.3064% -74 - C2 -3HQ7 7.7 ?
26 PsiBlast_CBE 82.2359% -75 - C2 -1ZZH 13.3 ?
28 PsiBlast_CBE 82.2159% -71 - C2 -1ZZH 13.3 ?
27 PsiBlast_CBE 82.0959% -71 - C2 -1ZZH 13.2 ?
9 PsiBlast_PDB 81.4259% -76 - C2 -1ZZH 13.2 ?
30 PsiBlast_CBE 81.0257% -76 - C2 -4AAO 10.6 ?
13 PsiBlast_PDB 80.5557% -75 - C2 -4AAO 11.1 ?
43 HHSearch 73.7649% -50 - C2 -3O5C 11.5 ?
32 PsiBlast_CBE 73.4649% -54 - C2 -3O5C 11.3 ?
14 PsiBlast_PDB 73.2649% -54 - C2 -3O5C 11.5 ?
42 HHSearch 72.9248% -50 - C2 -1IQC 11.0 CCPR_NITEU
35 PsiBlast_CBE 72.9048% -48 - C2 -1IQC 10.9 CCPR_NITEU
36 PsiBlast_CBE 72.8148% -46 - C2 -1IQC 11.1 CCPR_NITEU
34 PsiBlast_CBE 72.6448% -49 - C2 -1IQC 11.1 CCPR_NITEU
15 PsiBlast_PDB 72.6348% -50 - C2 -1IQC 11.2 CCPR_NITEU
31 PsiBlast_CBE 72.3149% -55 - C2 -3O5C 11.1 ?
66 Fugue 66.06100% -65 - C2 -1EB7 Error CCPR_PSEAE
67 Fugue 65.3290% -89 - C2 -1EB7 9.2 CCPR_PSEAE