@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4613: (2016-02-29 )
MNPSLNAFRPGRLLVAASLTASLLSLSVQAATLTRDNGAPVGDNQNSQTAGPNGSVLLQDVQLLQKLQRFDRERIPERVVHARGTGAHGEFVASADISDLSMAKVFRKGEKTPVFVRFSAVVHGNHSPETLRDPRGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRSNLDDDSRRFDFFSHVPEATRTLTLLYSNEGTPASYREMDGNSVHAYKLVNARGEVHYVKFHWKSLQGQKNLDPKQVAEVQGRDYSHMTNDLVSAIRKGDFPKWDLYIQVLKPEDLAKFDFDPLDATKIWPGIPERKIGQMVLNRNVDNFFQETEQVAMAPSNLVPGIEPSEDRLLQGRLFAYADTQMYRVGANGLGLPVNRPRSEVNTVNQDGALNAGHSTSGVNYQPSRLDPREEQASARYVRTPLSGTTQQAKIQREQNFKQTGELFRSYGKKDQADLIASLGGALAITDDESKYIMLSYFYKADSDYGTGLAKVAGADLQRVRQLAAKLQD

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_A_4(1QWM)
CATA_HELPY
[Raw transfer]



HEM_B_5(1QWM)
CATA_HELPY
[Raw transfer]



HEM_A_4(1QWL)
CATA_HELPY
[Raw transfer]



HEM_A_4(1QWL)
CATA_HELPY
[Raw transfer]



HEM_B_5(1QWL)
CATA_HELPY
[Raw transfer]



HEM_A_3(7CAT)
CATA_BOVIN
[Raw transfer]



HEM_A_3(8CAT)
CATA_BOVIN
[Raw transfer]



HEM_B_5(7CAT)
CATA_BOVIN
[Raw transfer]



HEM_B_5(8CAT)
CATA_BOVIN
[Raw transfer]



HEM_A_2(1GWE)
CATA_MICLU
[Raw transfer]



FMT_A_6(1QWM)
CATA_HELPY
[Raw transfer]



FMT_B_7(1QWM)
CATA_HELPY
[Raw transfer]
22 PsiBlast_CBE 99.6881% -50 - C7 -1M7S - CATB_PSESY -
1 PsiBlast_PDB 99.4681% -50 - C7 -1M7S - CATB_PSESY -
105 HHSearch 99.3981% -51 - C7 -1M7S - CATB_PSESY -
21 PsiBlast_CBE 99.3481% -51 - C7 -1M7S - CATB_PSESY -
23 PsiBlast_CBE 99.1581% -49 - C7 -1M7S - CATB_PSESY -
48 PsiBlast_CBE 86.0250% -39 - C7 -4CAB - CATA_DEIRA -
49 PsiBlast_CBE 85.9850% -39 - C7 -4CAB - CATA_DEIRA -
45 PsiBlast_CBE 85.6949% -41 - C7 -4QOL - ? -
4 PsiBlast_PDB 85.6849% -44 - C7 -4QOM - ? -
31 PsiBlast_CBE 85.6349% -42 - C7 -4QOQ - ? -
47 PsiBlast_CBE 85.5749% -42 - C7 -4QOL - ? -
39 PsiBlast_CBE 85.5749% -43 - C7 -4QON - ? -
33 PsiBlast_CBE 85.5749% -44 - C7 -4QOP - ? -
30 PsiBlast_CBE 85.4749% -42 - C7 -4QOQ - ? -
43 PsiBlast_CBE 85.4049% -42 - C7 -4QOM - ? -
38 PsiBlast_CBE 85.3949% -42 - C7 -4QOO - ? -
5 PsiBlast_PDB 85.3849% -44 - C7 -4QON - ? -
7 PsiBlast_PDB 85.2949% -44 - C7 -4QOP - ? -
3 PsiBlast_PDB 85.2649% -42 - C7 -4QOL - ? -
27 PsiBlast_CBE 85.1749% -42 - C7 -4QOR - ? -
109 HHSearch 84.4244% -44 - C7 -1QWL 12.8 CATA_HELPY
11 PsiBlast_PDB 83.5344% -47 - C7 -1QWL 12.8 CATA_HELPY
51 PsiBlast_CBE 83.3244% -49 - C7 -1QWM 12.9 CATA_HELPY
12 PsiBlast_PDB 82.8944% -48 - C7 -1QWM 12.8 CATA_HELPY
52 PsiBlast_CBE 82.3344% -47 - C7 -1QWL 12.7 CATA_HELPY
102 HHSearch 79.5738% -38 - C7 -1GWE 12.8 CATA_MICLU
59 PsiBlast_CBE 77.1045% -37 - C7 -8CAT 11.9 CATA_BOVIN
14 PsiBlast_PDB 76.6345% -39 - C7 -7CAT 11.6 CATA_BOVIN
60 PsiBlast_CBE 76.5145% -39 - C7 -7CAT 11.6 CATA_BOVIN
15 PsiBlast_PDB 76.0645% -37 - C7 -8CAT 11.6 CATA_BOVIN