@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4771: (2016-03-01 )
MIISASTDYRAAAQRKLPPFLFHYIDGGAYAEYTLRRNVEDLSAIALRQRVLKNMSELSLETRLFDETLAMPVALAPVGLTGMYARRGEVQAARAAAAKGVPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLGNISAYRGNPTGLEDYIGWLGANFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEISADSLVRELGA

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_E_5(2A85)
GOX_SPIOL
[Raw transfer]



FMN_I_9(1P4C)
GOX_SPIOL
[Raw transfer]



FMN_E_5(2A7N)
GOX_SPIOL
[Raw transfer]



FMN_A_5(1KBI)
CYB2_YEAST
[Raw transfer]



FMN_I_9(1P4C)
GOX_SPIOL
[Raw transfer]



FMN_I_9(1P5B)
GOX_SPIOL
[Raw transfer]



FMN_A_2(3GIY)
MDLB_PSEPU
[Raw transfer]



FMN_E_5(2A7P)
GOX_SPIOL
[Raw transfer]



FMN_F_6(1HUV)
GOX_SPIOL
[Raw transfer]



FMN_E_5(1AL8)
GOX_SPIOL
[Raw transfer]



FMN_E_5(1AL7)
GOX_SPIOL
[Raw transfer]



GLV_A_3(2RDU)
HAOX1_HUMAN
[Raw transfer]



3IL_M_13(2A7P)
GOX_SPIOL
[Raw transfer]



EDO_A_4(1KBJ)
CYB2_YEAST
[Raw transfer]



LAC_A_4(2NLI)
?
[Raw transfer]
3 PsiBlast_PDB 94.4135%-105 - C2 -2RDU 2.8 HAOX1_HUMAN
102 HHSearch 94.2236%-100 - C2 -1GOX - GOX_SPIOL -
4 PsiBlast_PDB 94.2035%-104 - C2 -2RDW - HAOX1_HUMAN -
2 PsiBlast_PDB 92.2135%-112 - C2 -2RDT - HAOX1_HUMAN -
10 PsiBlast_PDB 92.1335%-105 - C2 -1GOX - GOX_SPIOL -
104 HHSearch 91.9132%-106 - C2 -2NLI 4.2 ?
21 PsiBlast_CBE 91.9035%-113 - C2 -2W0U - HAOX1_HUMAN -
23 PsiBlast_CBE 91.6135%-114 - C2 -2W0U - HAOX1_HUMAN -
11 PsiBlast_PDB 91.0535%-105 - C2 -2A7N 9.9 GOX_SPIOL
1 PsiBlast_PDB 91.0235%-115 - C2 -2W0U - HAOX1_HUMAN -
22 PsiBlast_CBE 90.9235%-113 - C2 -2W0U - HAOX1_HUMAN -
33 PsiBlast_CBE 90.9031%-102 * C2 *4RJE - ? -
6 PsiBlast_PDB 90.7335%-102 - C2 -1P4C 9.6 GOX_SPIOL
7 PsiBlast_PDB 90.6835%-104 - C2 -1P5B 9.6 GOX_SPIOL (first)
5 PsiBlast_PDB 90.6435%-104 - C2 -1HUV 8.5 GOX_SPIOL (first)
8 PsiBlast_PDB 90.4835%-105 - C2 -1AL7 9.2 GOX_SPIOL
9 PsiBlast_PDB 90.3635%-110 - C2 -1AL8 9.8 GOX_SPIOL
35 PsiBlast_CBE 90.3331%-101 - C2 -4RJE - ? -
101 HHSearch 90.3136%-101 - C2 -1P4C 9.6 GOX_SPIOL
34 PsiBlast_CBE 90.0031%-102 - C2 -4RJE - ? -
12 PsiBlast_PDB 89.9735%-105 - C2 -2A7P 9.5 GOX_SPIOL (first)
105 HHSearch 89.9031% -98 - C2 -1KBI 10.6 CYB2_YEAST
14 PsiBlast_PDB 89.9035%-102 - C2 -3GIY 10.3 MDLB_PSEPU
13 PsiBlast_PDB 89.2535%-101 - C2 -2A85 9.7 GOX_SPIOL