@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4848: (2016-03-02 )
MLEKVLIANRGEIALRILRACKELGIKTVAVHSTADRELMHLSLADESVCIGPAPATQSYLQIPAIIAAAEVTGATAIHPGYGFLAENADFAEQIERSGFTFVGPTAEVIRLMGDKVSAKDAMKRAGVPTVPGSDGPLPEDEETALAIAREVGYPVIIKAAGGGGGRGMRVVYDESELIKSAKLTRTEAGAAFGNPMVYLEKFLTNPRHVEVQVLSDGQGNAIHLGDRDCSLQRRHQKVIEEAPAPGIDEKARQEVFARCVQACIEIGYRGAGTFEFLYENGRFYFIEMNTRVQVEHPVSEMVTGVDIVKEMLRIASGEKLSIRQEDVVIRGHALECRINAEDPKTFMPSPGKVKHFHAPGGNGVRVDSHLYSGYSVPPNYDSLVGKVITYGADRDEALARMRNALDELIVDGIKTNTELHKDLVRDAAFCKGGVNIHYLEKKLGMDKH

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]




ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]




ADP_A_8(3OUZ)
?
[Raw transfer]




ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]




ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]




ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]




AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]




ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]




ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]




ADP_B_4(3G8D)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RUP)
ACCC_ECOLI
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ANP_B_7(2VPQ)
?
[Raw transfer]




JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]




LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]




OA4_A_3(2W6P)
ACCC_ECOLI
[Raw transfer]




JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]




OA2_A_3(2W6N)
ACCC_ECOLI
[Raw transfer]




L22_A_3(2W70)
ACCC_ECOLI
[Raw transfer]




JZK_B_4(3JZF)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




OA2_B_5(2W6N)
ACCC_ECOLI
[Raw transfer]




L22_B_5(2W70)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(4RZQ)
ACCC_HAEIN
[Raw transfer]




OA3_A_3(2W6O)
ACCC_ECOLI
[Raw transfer]




OA3_C_5(2W6O)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]




1 PsiBlast_PDB 96.84100% -96 - C1 -2VQD 7.6 ACCC_PSEAE
21 PsiBlast_CBE 94.78100%-102 - C1 -2C00 - ACCC_PSEAE -
2 PsiBlast_PDB 93.82100%-102 - C1 -2C00 - ACCC_PSEAE -
37 PsiBlast_CBE 88.8171% -93 - C1 -2V59 6.2 ACCC_ECOLI
19 PsiBlast_PDB 88.6971% -93 - C1 -2W70 4.1 ACCC_ECOLI
29 PsiBlast_CBE 88.6771% -94 - C1 -2W70 3.9 ACCC_ECOLI
11 PsiBlast_PDB 88.5771% -93 - C1 -2V59 6.1 ACCC_ECOLI
5 PsiBlast_PDB 88.5571% -91 - C1 -3JZI 8.4 ACCC_ECOLI
14 PsiBlast_PDB 88.4771% -92 - C1 -2W6N 6.5 ACCC_ECOLI
15 PsiBlast_PDB 88.3571% -95 - C1 -2W6O 4.2 ACCC_ECOLI
22 PsiBlast_CBE 88.2771% -91 - C1 -3JZI 9.6 ACCC_ECOLI
46 PsiBlast_CBE 88.2470% -92 - C1 -3RV4 8.4 ACCC_ECOLI
16 PsiBlast_PDB 88.2071% -93 - C1 -2W6P 5.9 ACCC_ECOLI
23 PsiBlast_CBE 88.1871% -90 - C1 -3JZF 9.9 ACCC_ECOLI
49 PsiBlast_CBE 88.1271% -93 - C1 -3G8D 5.4 ACCC_ECOLI
33 PsiBlast_CBE 88.1271% -93 - C1 -2W6N 6.5 ACCC_ECOLI
31 PsiBlast_CBE 88.0471% -98 - C- -2W6Q - ACCC_ECOLI -
47 PsiBlast_CBE 88.0271% -91 - C1 -3G8C 6.3 ACCC_ECOLI
34 PsiBlast_CBE 88.0071%-101 - C- -2W6M - ACCC_ECOLI -
38 PsiBlast_CBE 87.7071%-100 - C- -2V58 - ACCC_ECOLI -
40 PsiBlast_CBE 87.6371% -93 - C1 -3RV3 6.3 ACCC_ECOLI
32 PsiBlast_CBE 87.5671% -94 - C1 -2W6O 3.8 ACCC_ECOLI
45 PsiBlast_CBE 87.4970% -95 - C1 -1DV2 5.9 ACCC_ECOLI
42 PsiBlast_CBE 87.4271% -93 - C1 -3RUP 6.9 ACCC_ECOLI
44 PsiBlast_CBE 87.2670% -90 - C1 -1DV2 4.8 ACCC_ECOLI
48 PsiBlast_CBE 87.2471% -92 - C1 -3G8C 6.1 ACCC_ECOLI
43 PsiBlast_CBE 87.2371% -88 - C1 -3RUP 8.0 ACCC_ECOLI
8 PsiBlast_PDB 87.1771% -94 - C1 -2J9G 5.8 ACCC_ECOLI
41 PsiBlast_CBE 87.0171% -92 - C1 -3RV3 8.0 ACCC_ECOLI
9 PsiBlast_PDB 86.9071% -94 - C1 -2VR1 4.8 ACCC_ECOLI
3 PsiBlast_PDB 84.4671% -98 - C1 -4RZQ 3.5 ACCC_HAEIN
119 HHSearch 81.3952% -87 - C1 -3OUZ 7.2 ?
51 PsiBlast_CBE 81.0251% -80 - C1 -2VPQ 6.2 ?
122 HHSearch 80.0751% -79 - C1 -2VPQ 7.0 ?
52 PsiBlast_CBE 79.9151% -81 - C1 -2VPQ 7.0 ?
110 Fugue 70.1641% -77 - C1 -3VA7 2.1 ?
99 PsiBlast_CBE 69.2142% -86 - C1 -3VA7 2.1 ?
130 HHSearch 68.8141% -86 * C1 *3VA7 2.1 ?