@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4852: (2016-03-02 )
MSVVRIGPYTLPNRLILAPMAGVTDRPFRQLCRRLGAGMVVSEMVTSDVRLWNSRKSRLRLIHDGEDEPRSVQIAGGDPAMLAEAAQRNVELGAQIIDINMGCPAKKVCNKAAGSALLRDEALVAEILDAVVRAVDVPVTLKIRTGWDRDNRNGVTVAKLAEQAGIQALAVHGRTRADLYTGEAEYETIAAIKQAVSIPVFANGDIDSPEKARKVIEQTGVDALLIGRAAQGRPWIFREIDHYLRTGEHLPAAPLPEVQSILLEHLAELHLFYGEEMGVRIARKHVGWYLATLPGAREFRAQFNRLQDTDAQCASVRQFFAERQNNGTGVAA

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_A_3(4BFA)
DUSC_ECOLI
[Raw transfer]



FMN_A_3(4YCP)
DUSC_ECOLI
[Raw transfer]



FMN_A_3(4BFA)
DUSC_ECOLI
[Raw transfer]



FMN_B_7(4BFA)
DUSC_ECOLI
[Raw transfer]



FMN_A_5(1VHN)
?
[Raw transfer]



FMN_A_2(4BF9)
DUSC_ECOLI
[Raw transfer]



FMN_A_2(3W9Z)
DUSC_ECOLI
[Raw transfer]



FMN_A_5(1VHN)
?
[Raw transfer]



FMN_A_5(1VHN)
?
[Raw transfer]



FNR_A_2(4XP7)
DUS2L_HUMAN
[Raw transfer]
123 HHSearch 96.9634% -92 - C2 -1VHN 8.6 ?
1 PsiBlast_PDB 95.1632% -94 - C2 -1VHN 8.6 ?
113 Fugue 91.0831% -97 - C2 -1VHN 7.1 ?
115 Fugue 87.3830% -89 - C2 -4BFA 10.3 DUSC_ECOLI
2 PsiBlast_PDB 83.4233% -94 - C2 -4BFA 10.2 DUSC_ECOLI
3 PsiBlast_PDB 83.1033%-107 - C2 -3W9Z 10.5 DUSC_ECOLI
22 PsiBlast_CBE 82.5832% -96 - C2 -4YCO - DUSC_ECOLI -
4 PsiBlast_PDB 82.5132% -96 - C2 -4YCO - DUSC_ECOLI -
21 PsiBlast_CBE 82.0033% -96 - C2 -4BFA 10.1 DUSC_ECOLI
5 PsiBlast_PDB 81.6232% -95 - C2 -4YCP 10.5 DUSC_ECOLI
6 PsiBlast_PDB 81.5432% -94 - C2 -4BF9 9.8 DUSC_ECOLI
23 PsiBlast_CBE 80.7032% -95 - C2 -4YCO - DUSC_ECOLI -
124 HHSearch 79.0929% -84 - C2 -3B0P - DUSAL_THET8 -
114 Fugue 78.5729% -87 - C2 -3B0P - DUSAL_THET8 -
127 HHSearch 77.0821% -87 - C2 -3HGJ - ? -
9 PsiBlast_PDB 76.9734% -92 - C2 -3B0V - DUSAL_THET8 -
24 PsiBlast_CBE 75.6834% -85 * C2 *3B0U - DUSAL_THET8 -
8 PsiBlast_PDB 75.3834% -88 - C2 -3B0U - DUSAL_THET8 -
25 PsiBlast_CBE 75.1634% -89 - C2 -3B0P - DUSAL_THET8 -
7 PsiBlast_PDB 73.5334% -87 - C2 -3B0P - DUSAL_THET8 -
10 PsiBlast_PDB 50.4431% -38 - C2 -4XP7 6.0 DUS2L_HUMAN