@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4901: (2016-03-02 )
MKTVHSASYEILRRHGLTTVFGNPGSNELPFLKDFPEDFRYILGLHEGAVVGMADGFALASGRPAFVNLHAAAGTGNGMGALTNAWYSHSPLVITAGQQVRSMIGVEAMLANVDAGQLPKPLVKWSHEPACAQDVPRALSQAIQTASLPPRAPVYLSIPYDDWAQPAPAGVEHLAARQVSGAALPAPALLAELGERLSRSRNPVLVLGPDVDGANANGLAVELAEKLRMPAWVAPSASRCPFPTRHACFRGVLPAAIAGISRLLDGHDLILVVGAPVFRYHQFAPGDYLPAGAELVQVTCDPGEAARAPMGDALVGDIALTLEALLEQVRPSARPLPEALPRPPALAEEGGPLRPETVFDVIDALAPRDAIFVKESTSTVTAFWQRVEMREPGSYFFPAAGGLGFGLPAAVGAQLAQPRRQVIGIIGDGSANYGITALWSAAQYRVPAVFIILKNGTYGALRWFAGVLEVPDAPGLDVPGLDFCAIARGYGVEALHAATREELEGALKHALAADRPVLIEVPTQTIEP

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TZD_A_2(4K9L)
MDLC_PSEPU
[Raw transfer]




TZD_A_5(4MZX)
MDLC_PSEPU
[Raw transfer]




TZD_A_6(4QEL)
MDLC_PSEPU
[Raw transfer]




TZD_X_2(4JUD)
MDLC_PSEPU
[Raw transfer]




TZD_A_6(4JU8)
MDLC_PSEPU
[Raw transfer]




TPP_A_5(1BFD)
MDLC_PSEPU
[Raw transfer]




TZD_A_2(4JD5)
MDLC_PSEPU
[Raw transfer]




TPP_A_2(4K9K)
MDLC_PSEPU
[Raw transfer]




TZD_A_6(1Q6Z)
MDLC_PSEPU
[Raw transfer]




TZD_A_6(1PO7)
MDLC_PSEPU
[Raw transfer]




TZD_A_5(4JU9)
MDLC_PSEPU
[Raw transfer]




TPP_A_4(4MQ5)
MDLC_PSEPU
[Raw transfer]




D7K_X_2(3FSJ)
MDLC_PSEPU
[Raw transfer]




TZD_A_6(1Q6Z)
MDLC_PSEPU
[Raw transfer]




TPP_A_5(4MPJ)
MDLC_PSEPU
[Raw transfer]




TZD_A_7(4GM1)
MDLC_PSEPU
[Raw transfer]




TPP_A_2(4K9M)
MDLC_PSEPU
[Raw transfer]




TZD_A_6(1YNO)
MDLC_PSEPU
[Raw transfer]




TDP_A_6(2FWN)
MDLC_PSEPU
[Raw transfer]




TZD_A_6(2FN3)
MDLC_PSEPU
[Raw transfer]




TPP_A_3(4MPR)
MDLC_PSEPU
[Raw transfer]




TZD_A_6(4GPE)
MDLC_PSEPU
[Raw transfer]




TZD_A_2(4GG1)
MDLC_PSEPU
[Raw transfer]




TZD_A_6(1PI3)
MDLC_PSEPU
[Raw transfer]




TZD_A_3(4JUA)
MDLC_PSEPU
[Raw transfer]




TZD_A_2(4GM0)
MDLC_PSEPU
[Raw transfer]




TZD_A_6(4MPP)
MDLC_PSEPU
[Raw transfer]




TZD_A_3(4GP9)
MDLC_PSEPU
[Raw transfer]




TZD_A_6(4GM4)
MDLC_PSEPU
[Raw transfer]




FMT_B_8(4Q9D)
?
[Raw transfer]




FMT_A_5(4Q9D)
?
[Raw transfer]




EDO_A_7(4K9L)
MDLC_PSEPU
[Raw transfer]




33 PsiBlast_CBE 98.0363%-114 - C6 -1MCZ - MDLC_PSEPU -
15 PsiBlast_PDB 97.8863%-113 - C6 -4MQ5 8.7 MDLC_PSEPU
36 PsiBlast_CBE 97.8363%-115 - C6 -1MCZ - MDLC_PSEPU -
57 PsiBlast_CBE 97.8263%-112 - C6 -4JUB - MDLC_PSEPU -
39 PsiBlast_CBE 97.8163%-112 - C6 -2V3W - MDLC_PSEPU -
65 PsiBlast_CBE 97.7563%-114 - C6 -4MZX 8.3 MDLC_PSEPU
9 PsiBlast_PDB 97.7463%-113 - C6 -1PI3 8.7 MDLC_PSEPU
41 PsiBlast_CBE 97.7363%-113 - C6 -2V3W - MDLC_PSEPU -
2 PsiBlast_PDB 97.7263%-114 - C6 -1MCZ - MDLC_PSEPU -
55 PsiBlast_CBE 97.4463%-114 - C6 -4JUA 8.7 MDLC_PSEPU
37 PsiBlast_CBE 97.3863%-114 - C6 -1MCZ - MDLC_PSEPU -
16 PsiBlast_PDB 97.3763%-112 - C6 -2V3W - MDLC_PSEPU -
59 PsiBlast_CBE 97.3263%-114 - C6 -4JUB - MDLC_PSEPU -
58 PsiBlast_CBE 97.2863%-116 - C6 -4JUB - MDLC_PSEPU -
34 PsiBlast_CBE 97.2863%-113 - C6 -1MCZ - MDLC_PSEPU -
64 PsiBlast_CBE 97.2363%-115 - C6 -4JU9 8.8 MDLC_PSEPU
25 PsiBlast_CBE 97.2263%-113 - C6 -1MCZ - MDLC_PSEPU -
43 PsiBlast_CBE 97.2163%-113 - C6 -5DEI - ? -
42 PsiBlast_CBE 97.2163%-115 - C6 -5DEI - ? -
38 PsiBlast_CBE 97.2063%-113 - C6 -1MCZ - MDLC_PSEPU -
51 PsiBlast_CBE 97.1463%-115 - C6 -4GM0 8.7 MDLC_PSEPU
4 PsiBlast_PDB 97.1263%-114 - C6 -3FSJ 10.3 MDLC_PSEPU
53 PsiBlast_CBE 97.0363%-115 - C6 -4JU8 8.4 MDLC_PSEPU
52 PsiBlast_CBE 97.0363%-114 - C6 -4JD5 8.7 MDLC_PSEPU
11 PsiBlast_PDB 97.0363%-112 - C6 -2FN3 8.9 MDLC_PSEPU
3 PsiBlast_PDB 97.0163%-114 - C6 -1BFD 8.8 MDLC_PSEPU
54 PsiBlast_CBE 96.9863%-114 - C6 -4QEL 8.4 MDLC_PSEPU
1 PsiBlast_PDB 96.9463%-113 - C6 -4MPR 8.8 MDLC_PSEPU
6 PsiBlast_PDB 96.8663%-114 - C6 -4GPE 8.9 MDLC_PSEPU
12 PsiBlast_PDB 96.8063%-114 - C6 -2FWN 8.5 MDLC_PSEPU
10 PsiBlast_PDB 96.7863%-114 - C6 -4GP9 8.1 MDLC_PSEPU
48 PsiBlast_CBE 96.7663%-114 - C6 -4GM1 8.7 MDLC_PSEPU
50 PsiBlast_CBE 96.7163%-112 - C6 -1PO7 8.7 MDLC_PSEPU
14 PsiBlast_PDB 96.7063%-113 - C6 -4MPJ 8.7 MDLC_PSEPU
8 PsiBlast_PDB 96.7063%-113 - C6 -4JUD 8.9 MDLC_PSEPU
13 PsiBlast_PDB 96.6963%-115 - C6 -4GG1 8.6 MDLC_PSEPU
7 PsiBlast_PDB 96.6363%-114 - C6 -4GM4 8.3 MDLC_PSEPU
66 PsiBlast_CBE 96.6063%-115 - C6 -4K9M 8.3 MDLC_PSEPU
17 PsiBlast_PDB 96.5763%-115 - C6 -1YNO 8.8 MDLC_PSEPU
81 PsiBlast_CBE 96.3562%-113 - C6 -4MPP 8.2 MDLC_PSEPU
49 PsiBlast_CBE 96.3363%-113 - C6 -1Q6Z 9.0 MDLC_PSEPU
67 PsiBlast_CBE 96.0363%-115 - C6 -4K9K 8.4 MDLC_PSEPU
80 PsiBlast_CBE 94.8463%-114 - C6 -4K9L 8.6 MDLC_PSEPU
96 HHSearch 94.6361%-111 * C6 *1Q6Z 9.0 MDLC_PSEPU
83 PsiBlast_CBE 88.4747%-111 - C6 -4Q9D 3.5 ?
82 PsiBlast_CBE 87.2747%-109 - C6 -4Q9D 3.5 ?