@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4944: (2016-03-02 )
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLPSGDQPAEPGNA

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C_E_22(4J6W)
HFQ_PSEAE
[Raw transfer]




CTP_B_11(4J6W)
HFQ_PSEAE
[Raw transfer]




C_D_17(4J6W)
HFQ_PSEAE
[Raw transfer]




ANP_D_11(3QUI)
HFQ_PSEAE
[Raw transfer]




CTP_B_11(4J6W)
HFQ_PSEAE
[Raw transfer]




NHE_A_6(3GIB)
HFQ_ECOLI
[Raw transfer]




NHE_C_7(3GIB)
HFQ_ECOLI
[Raw transfer]




NACID_E_5(4HT9)
?
[Raw transfer]

-

C_E_22(4J6W)
HFQ_PSEAE
[Raw transfer]




C_C_14(4J6W)
HFQ_PSEAE
[Raw transfer]




NACID_K_7(3RER)
HFQ_ECOLI
[Raw transfer]

-

NHE_C_7(3GIB)
HFQ_ECOLI
[Raw transfer]




ANP_D_11(3QUI)
HFQ_PSEAE
[Raw transfer]




NACID_K_7(3RER)
HFQ_ECOLI
[Raw transfer]

-

NACID_E_5(4HT9)
?
[Raw transfer]

-

NACID_E_5(4HT9)
?
[Raw transfer]

-

ANP_D_11(3QUI)
HFQ_PSEAE
[Raw transfer]




U_A_4(4MML)
HFQ_PSEAE
[Raw transfer]




UTP_E_11(4J6X)
HFQ_PSEAE
[Raw transfer]




UTP_C_9(4J6X)
HFQ_PSEAE
[Raw transfer]




UTP_F_12(4J6X)
HFQ_PSEAE
[Raw transfer]




UTP_D_10(4J6X)
HFQ_PSEAE
[Raw transfer]




UTP_B_8(4J6X)
HFQ_PSEAE
[Raw transfer]




UTP_A_7(4J6X)
HFQ_PSEAE
[Raw transfer]




PEG_D_12(4J5Y)
HFQ_PSEAE
[Raw transfer]




NACID_K_7(3RER)
HFQ_ECOLI
[Raw transfer]

-

53 PsiBlast_CBE 94.8198%-164 - C4 -4MMK - HFQ_PSEAE -
44 PsiBlast_CBE 93.66100%-161 - C4 -3QUI 3.0 HFQ_PSEAE
57 PsiBlast_CBE 93.5498%-163 - C4 -3M4G - HFQ_PSEAE -
62 PsiBlast_CBE 93.3598%-174 - C4 -3M4G - HFQ_PSEAE -
22 PsiBlast_CBE 92.84100%-168 - C4 -4J6Y - HFQ_PSEAE -
36 PsiBlast_CBE 92.78100%-162 - C4 -4J5Y - HFQ_PSEAE -
59 PsiBlast_CBE 91.9798%-167 - C4 -3M4G - HFQ_PSEAE -
55 PsiBlast_CBE 91.8298%-164 - C4 -4MMK - HFQ_PSEAE -
32 PsiBlast_CBE 91.82100%-166 - C4 -4J6W 3.4 HFQ_PSEAE
21 PsiBlast_CBE 91.78100%-171 - C4 -4J6Y - HFQ_PSEAE -
63 PsiBlast_CBE 91.7698%-162 - C4 -3M4G - HFQ_PSEAE -
60 PsiBlast_CBE 91.6898%-161 - C4 -3M4G - HFQ_PSEAE -
3 PsiBlast_PDB 91.64100%-153 - C4 -3QUI - HFQ_PSEAE -
61 PsiBlast_CBE 91.6098%-162 - C4 -3M4G - HFQ_PSEAE -
39 PsiBlast_CBE 91.56100%-165 - C4 -4J5Y - HFQ_PSEAE -
66 PsiBlast_CBE 91.3498%-161 - C4 -3M4G - HFQ_PSEAE -
58 PsiBlast_CBE 91.1898%-164 - C4 -3M4G - HFQ_PSEAE -
27 PsiBlast_CBE 91.10100%-153 - C4 -4J6X 3.0 HFQ_PSEAE
56 PsiBlast_CBE 91.0598%-160 - C4 -4MMK - HFQ_PSEAE -
24 PsiBlast_CBE 91.03100%-168 - C4 -4J6Y - HFQ_PSEAE -
9 PsiBlast_PDB 89.9398%-172 - C4 -4MML 3.5 HFQ_PSEAE
34 PsiBlast_CBE 89.61100%-172 - C4 -4J6W 2.7 HFQ_PSEAE
42 PsiBlast_CBE 89.57100%-161 - C4 -3QUI 2.7 HFQ_PSEAE
5 PsiBlast_PDB 89.50100%-158 - C4 -4J6W 2.0 HFQ_PSEAE
33 PsiBlast_CBE 89.29100%-167 - C4 -4J6W 3.0 HFQ_PSEAE
31 PsiBlast_CBE 89.15100%-162 - C4 -4J6W 2.9 HFQ_PSEAE
29 PsiBlast_CBE 89.12100%-169 - C4 -4J6X 3.0 HFQ_PSEAE
26 PsiBlast_CBE 88.89100%-162 - C4 -4J6X 3.2 HFQ_PSEAE
28 PsiBlast_CBE 88.88100%-164 - C4 -4J6X 2.7 HFQ_PSEAE
35 PsiBlast_CBE 88.84100%-166 - C4 -4J6W 3.5 HFQ_PSEAE
43 PsiBlast_CBE 88.81100%-159 - C4 -3QUI 3.7 HFQ_PSEAE
30 PsiBlast_CBE 88.32100%-161 - C4 -4J6X 2.6 HFQ_PSEAE
38 PsiBlast_CBE 87.74100%-150 - C4 -4J5Y 3.0 HFQ_PSEAE
74 PsiBlast_CBE 87.1092%-166 - C4 -3GIB 3.8 HFQ_ECOLI
6 PsiBlast_PDB 86.64100%-164 - C4 -4J6X 3.1 HFQ_PSEAE
101 PsiBlast_CBE 85.5892%-179 - C4 -3RER 2.9 HFQ_ECOLI
20 PsiBlast_PDB 85.0992%-171 - C4 -3GIB 4.1 HFQ_ECOLI
73 PsiBlast_CBE 84.5892%-175 - C4 -3GIB 2.4 HFQ_ECOLI
103 PsiBlast_CBE 84.5792%-167 - C4 -3RER 2.9 HFQ_ECOLI
80 PsiBlast_CBE 84.0592%-171 - C4 -4HT9 2.4 ?
81 PsiBlast_CBE 83.5592%-169 - C4 -4HT9 4.8 ?
100 PsiBlast_CBE 82.8292%-174 - C4 -3RER 3.7 HFQ_ECOLI
79 PsiBlast_CBE 82.3592%-170 - C4 -4HT9 2.9 ?