@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4946: (2016-03-02 )
MSEAPRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGSRRIDVEVEQGGIKLLRVRDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAWQVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIEVERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPTFVLFFEVDPAVVDVNVHPTKHEVRFRDSRMVHDFLYGTLHRALGEVRPDDQLAPPGATSLTEPRPTGAAAGEFGPQGEMRLAESVLESPAARVGWSGGSSASGGSSGYSAYTRPEAPPSLAEAGGAYKAYFAPLPAGEAPAALPESAQDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERITYERLKVAMASEGLRGQPLLVPESIAVSEREADCAEEHSSWFQRLGFELQRLGPESLAIRQIPALLKQAEATQLVRDVIADLLEYGTSDRIQAHLNELLGTMACHGAVRANRRLTLPEMNALLRDMEITERSGQCNHGRPTWTQLGLDELDKLFLRGR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_4(1NHJ)
MUTL_ECOLI
[Raw transfer]



ANP_A_6(1NHI)
MUTL_ECOLI
[Raw transfer]



ANP_A_9(1NHH)
MUTL_ECOLI
[Raw transfer]



SAP_A_4(1H7U)
PMS2_HUMAN
[Raw transfer]
59 Fugue 93.8262%-100 - C1 -1B63 10.1 MUTL_ECOLI
38 HHSearch 93.1362% -97 - C1 -1B63 10.1 MUTL_ECOLI
3 PsiBlast_PDB 92.4863% -94 - C1 -1NHI 10.0 MUTL_ECOLI
1 PsiBlast_PDB 91.2763% -91 - C1 -1B63 10.1 MUTL_ECOLI
2 PsiBlast_PDB 89.9463% -95 - C1 -1NHH 10.0 MUTL_ECOLI
5 PsiBlast_PDB 89.6463% -93 - C1 -1NHJ 10.1 MUTL_ECOLI
4 PsiBlast_PDB 87.4863% -81 - C- -1B62 - MUTL_ECOLI -
40 HHSearch 72.2425% -86 * C1 *3H4L - PMS1_YEAST -
8 PsiBlast_PDB 69.4428% -97 - C1 -1H7U 3.9 PMS2_HUMAN
10 PsiBlast_PDB 68.1126% -79 - C1 -3H4L - PMS1_YEAST -
62 Fugue 67.0166% -58 - C1 -1B63 9.6 MUTL_ECOLI
63 Fugue 64.9665% -48 - C1 -1B63 9.6 MUTL_ECOLI
7 PsiBlast_PDB 64.3528% -94 - C1 -1EA6 - PMS2_HUMAN -
6 PsiBlast_PDB 56.8051% -89 - C2 -3NCV - MUTL_NEIG1 -
64 Fugue 56.0654%-123 - C1 -1B63 Error MUTL_ECOLI
42 HHSearch 55.4651% -89 - C2 -3NCV - MUTL_NEIG1 -
66 Fugue 53.4046%-103 - C1 -1B63 Error MUTL_ECOLI
12 PsiBlast_PDB 52.3233% -75 - C2 -3KDG - MUTL_BACSU -
60 Fugue 52.1033% -74 * C2 *3KDG - MUTL_BACSU -
11 PsiBlast_PDB 52.0533% -79 - C2 -3GAB - MUTL_BACSU -