@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4949: (2016-03-02 )
MTMTFQHDDLPLALYSAAQVRDLDARLIAAGTPGFELMQRAAHAAWRALRRRWPEAAALTVLAGHGNNAGDGYLIAALAQRAGWRVRVLAVAAPQRLAGDAAQAHAAALATGVVVEPWSECAVLEGVVVDALLGTGLAGAVREPFAQAIRLANAADLPVLAVDIPSGLSADTGAVLGEAIRADLTVTFIGLKIGLFTGEAPARVGELVFDELGSDAVVLQGLQPRAHRLARNALPSLAARPRTAHKGLFGHLLVVGGDTGMGGAVLLAAESALRCGAGLVSAATRVEHVPALLSRCPEVMAHGVASANQLLALAERASVLVLGPGLGQRAWGRSLLSAVRSRPLPQVWDADALNLLALEPVGAGPRTWILTPHPGEAARLLGRSTAEVQADRPAAALELARRYQAVVVLKGAGSLVAAPDGRLAVCSQGHPAMAGAGLGDVLSGITGALLAQRVEAFEAACLAVWLHAAAGERLGAQGRGLAATDLIPTVRQLLEECSPCLK

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NPW_A_7(3RU3)
NNR_THEMA
[Raw transfer]




B4P_A_3(3RQX)
NNRD_BACSU
[Raw transfer]




NPW_A_4(3RPZ)
NNRD_BACSU
[Raw transfer]




NAX_A_7(3RTD)
NNR_THEMA
[Raw transfer]




NPW_A_4(3RPZ)
NNRD_BACSU
[Raw transfer]




NAX_A_4(3RQ2)
NNRD_BACSU
[Raw transfer]




AP5_A_3(3RQ8)
NNRD_BACSU
[Raw transfer]




NAX_A_5(3RSQ)
NNR_THEMA
[Raw transfer]




ADQ_A_7(3RT7)
NNR_THEMA
[Raw transfer]




APR_A_3(3RQ6)
NNRD_BACSU
[Raw transfer]




NAD_A_7(3RSG)
NNR_THEMA
[Raw transfer]




NAD_A_7(3RTC)
NNR_THEMA
[Raw transfer]




APR_A_6(3RS8)
NNR_THEMA
[Raw transfer]




COA_A_7(3RTG)
NNR_THEMA
[Raw transfer]




ATP_A_6(3RRF)
NNR_THEMA
[Raw transfer]




ATP_A_6(3RTG)
NNR_THEMA
[Raw transfer]




NAP_A_7(3RTE)
NNR_THEMA
[Raw transfer]




B6P_A_3(3RQH)
NNRD_BACSU
[Raw transfer]




ACO_A_5(3RTA)
NNR_THEMA
[Raw transfer]




ATP_A_6(3RTE)
NNR_THEMA
[Raw transfer]




NPW_A_5(3RU2)
NNR_THEMA
[Raw transfer]




ADP_A_7(3RRE)
NNR_THEMA
[Raw transfer]




APR_A_7(3RS8)
NNR_THEMA
[Raw transfer]




BA3_A_3(3RQQ)
NNRD_BACSU
[Raw transfer]




APR_A_6(3RSG)
NNR_THEMA
[Raw transfer]




BA3_A_6(3RS9)
NNR_THEMA
[Raw transfer]




ADP_A_5(3RRE)
NNR_THEMA
[Raw transfer]




AMP_A_5(3RPH)
NNRD_BACSU
[Raw transfer]




A3P_A_4(3RTB)
NNR_THEMA
[Raw transfer]




AMP_A_5(3RRB)
NNR_THEMA
[Raw transfer]




EDO_A_9(2R3B)
NNRD_ENTFA
[Raw transfer]




29 HHSearch 93.8330%-112 * C3 *3RSS - NNR_THEMA -
3 PsiBlast_PDB 81.5534%-110 - C3 -3RSF - NNR_THEMA -
14 PsiBlast_PDB 81.4434%-110 - C3 -3RRB 3.3 NNR_THEMA
20 PsiBlast_PDB 81.3234%-110 - C3 -3RU2 5.2 NNR_THEMA
17 PsiBlast_PDB 81.1934%-110 - C3 -3RRJ - NNR_THEMA -
8 PsiBlast_PDB 81.1834%-107 - C3 -3RTA 4.2 NNR_THEMA
7 PsiBlast_PDB 81.0234%-107 - C3 -3RT9 - NNR_THEMA -
12 PsiBlast_PDB 80.9834%-106 - C3 -3RTG 5.9 NNR_THEMA
15 PsiBlast_PDB 80.6334%-106 - C3 -3RRE 5.9 NNR_THEMA
16 PsiBlast_PDB 80.5634%-107 - C3 -3RRF 5.6 NNR_THEMA
9 PsiBlast_PDB 80.5634%-107 - C3 -3RTC 3.6 NNR_THEMA
6 PsiBlast_PDB 80.3634%-107 - C3 -3RT7 3.8 NNR_THEMA
2 PsiBlast_PDB 80.3334%-106 - C3 -3RS9 6.1 NNR_THEMA
18 PsiBlast_PDB 80.2834%-107 - C3 -3RSG 6.7 NNR_THEMA
19 PsiBlast_PDB 80.2634%-108 - C3 -3RTB 3.3 NNR_THEMA
1 PsiBlast_PDB 80.1734%-107 - C3 -3RS8 6.7 NNR_THEMA
4 PsiBlast_PDB 80.1234%-109 - C3 -3RSQ 4.8 NNR_THEMA
11 PsiBlast_PDB 79.9734%-107 - C3 -3RTE 6.9 NNR_THEMA
5 PsiBlast_PDB 79.7434%-107 - C3 -3RSS - NNR_THEMA -
13 PsiBlast_PDB 79.5134%-105 - C3 -3RU3 5.6 NNR_THEMA
10 PsiBlast_PDB 79.0434%-106 - C3 -3RTD 5.3 NNR_THEMA
36 HHSearch 68.0330%-104 - C3 -3RPZ 5.5 NNRD_BACSU
22 PsiBlast_CBE 65.1134% -99 - C3 -3RQQ 6.6 NNRD_BACSU
27 PsiBlast_CBE 64.5534%-100 - C3 -3RPZ 5.5 NNRD_BACSU
23 PsiBlast_CBE 64.1234% -99 - C3 -3RQH 6.3 NNRD_BACSU
25 PsiBlast_CBE 63.9834% -98 - C3 -3RQ6 6.8 NNRD_BACSU
26 PsiBlast_CBE 63.9734% -99 - C3 -3RQ2 5.5 NNRD_BACSU
28 PsiBlast_CBE 63.9634% -98 - C3 -3RPH 4.2 NNRD_BACSU
21 PsiBlast_CBE 63.9334% -99 - C3 -3RQX 9.1 NNRD_BACSU
24 PsiBlast_CBE 63.1634% -97 - C3 -3RQ8 7.6 NNRD_BACSU