@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4975: (2016-03-03 )
MNVLIVHAHNEPQSFTRALCDQACETLAGQGHAVQVSDLYAMNWNPVASAADFAERADPDYLVYALEQRESVKRQSLAADIQAELDKLLWADLLILNFPIYWFSVPAILKGWFDRVLVSGVCYGGKRFYDQGGLAGKKALVSLTLGGRQHMFGEGAIHGPLEDMLRPILRGTLAYVGMQVLEPFVAWHVPYISEEARGNFLRAYRARLENLEQDVPLRFPRLEQFDALLQPLAR

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_B_6(4QOJ)
?
[Raw transfer]




FMN_A_3(4QOF)
NQO2_HUMAN
[Raw transfer]




FMN_B_5(4QOF)
NQO2_HUMAN
[Raw transfer]




FMN_A_3(4QOJ)
?
[Raw transfer]




FMN_A_3(4QOI)
NQO2_HUMAN
[Raw transfer]




FMN_B_6(4QOI)
NQO2_HUMAN
[Raw transfer]




ML1_B_7(4QOG)
NQO2_HUMAN
[Raw transfer]




ML1_B_7(2QX4)
NQO2_HUMAN
[Raw transfer]




GOL_A_6(4QOD)
NQO2_HUMAN
[Raw transfer]




GOL_A_3(4QOD)
NQO2_HUMAN
[Raw transfer]




AA_A_7(3TZB)
NQO2_HUMAN
[Raw transfer]




GOL_B_8(4QOD)
NQO2_HUMAN
[Raw transfer]




GOL_A_3(4QOE)
NQO2_HUMAN
[Raw transfer]




A7B_A_5(3NHY)
NQO2_HUMAN
[Raw transfer]




LDP_B_8(2QMZ)
NQO2_HUMAN
[Raw transfer]




LDP_A_6(2QMZ)
NQO2_HUMAN
[Raw transfer]




102 Fugue 94.7140%-134 - C1 -1D4A - NQO1_HUMAN -
111 HHSearch 94.0641%-134 - C1 -1D4A - NQO1_HUMAN -
34 PsiBlast_CBE 91.6743%-136 - C1 -3OVM - NQO2_HUMAN -
75 PsiBlast_CBE 91.3843%-137 - C1 -3NFR - NQO2_HUMAN -
3 PsiBlast_PDB 91.0743%-136 - C1 -2QWX - NQO2_HUMAN -
17 PsiBlast_PDB 91.0443%-136 - C1 -4QOI 8.3 NQO2_HUMAN
82 PsiBlast_CBE 90.9143%-136 - C1 -2QX6 - NQO2_HUMAN -
36 PsiBlast_CBE 90.8843%-135 - C1 -3G5M - NQO2_HUMAN -
38 PsiBlast_CBE 90.8443%-136 - C1 -1ZX1 - NQO2_HUMAN -
67 PsiBlast_CBE 90.7643%-136 - C1 -3NHL - NQO2_HUMAN -
21 PsiBlast_CBE 90.7543%-137 - C1 -3O73 - NQO2_HUMAN -
14 PsiBlast_PDB 90.7243%-137 - C1 -4QOF 8.3 NQO2_HUMAN
15 PsiBlast_PDB 90.7143%-136 - C1 -4QOG 2.4 NQO2_HUMAN
53 PsiBlast_CBE 90.6443%-134 - C1 -3O2N - NQO2_HUMAN -
61 PsiBlast_CBE 90.5743%-137 - C1 -3NHS - NQO2_HUMAN -
51 PsiBlast_CBE 90.4743%-136 - C1 -3UXE - NQO2_HUMAN -
97 PsiBlast_CBE 90.3343%-134 - C1 -4FGK - NQO2_HUMAN -
55 PsiBlast_CBE 90.3343%-134 - C1 -3NHY - NQO2_HUMAN -
13 PsiBlast_PDB 90.1743%-135 - C1 -4QOE - NQO2_HUMAN -
84 PsiBlast_CBE 90.0843%-137 - C1 -2QX4 2.5 NQO2_HUMAN
22 PsiBlast_CBE 90.0143%-135 - C1 -4QOJ 8.0 ?
27 PsiBlast_CBE 89.7643%-135 - C1 -4QOE 2.6 NQO2_HUMAN
18 PsiBlast_PDB 89.5943%-134 - C1 -4QOJ 8.4 ?
26 PsiBlast_CBE 89.4343%-138 - C1 -4QOF 8.4 NQO2_HUMAN
12 PsiBlast_PDB 89.3743%-135 - C1 -4QOD 2.1 NQO2_HUMAN
87 PsiBlast_CBE 89.3043%-136 - C1 -2QMZ 3.0 NQO2_HUMAN
23 PsiBlast_CBE 88.9943%-136 - C1 -4QOI 8.2 NQO2_HUMAN
41 PsiBlast_CBE 88.7143%-135 - C1 -3TZB 2.5 NQO2_HUMAN
28 PsiBlast_CBE 88.6643%-135 - C1 -4QOD 3.1 NQO2_HUMAN
86 PsiBlast_CBE 87.2643%-135 - C1 -2QMZ 2.4 NQO2_HUMAN
56 PsiBlast_CBE 85.9443%-133 - C1 -3NHY 2.7 NQO2_HUMAN