@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5025: (2016-03-03 )
MKLETLAVHAGYSPDPTTRAVAVPIYQTTSYAFDDTQHGADLFDLKVPGNIYTRIMNPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTVAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIQARFAAHDDVAALEALIDERTKAVFCETIGNPAGNIIDLQALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYMGGHGTSIGGIVVDSGKFDWAANKSRFPLLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHCDNALAVARYLQQHPQVAWVKYAGLADNPEHALARRYLGGRPAAILSFGIQGGSAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNAEELARAGVSDDMVRLSIGIEHIDDILADLDQALAAAAR

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLG_A_2(4HF8)
?
[Raw transfer]



LCS_A_2(4OMA)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



PLP_B_8(1E5F)
?
[Raw transfer]



PZP_A_2(3MKJ)
?
[Raw transfer]



PPJ_B_7(1E5E)
?
[Raw transfer]



PLP_A_3(2CTZ)
?
[Raw transfer]



PLP_A_3(2CTZ)
?
[Raw transfer]



PLP_A_3(1E5F)
?
[Raw transfer]



PLP_B_4(2CTZ)
?
[Raw transfer]



NLE_A_2(3JWB)
?
[Raw transfer]



MPJ_A_2(3JWA)
?
[Raw transfer]



EDO_A_22(1PFF)
?
[Raw transfer]



ECX_A_2(3JW9)
?
[Raw transfer]
101 HHSearch 93.6056%-114 - C1 -2CTZ 4.6 ?
1 PsiBlast_PDB 93.4155%-114 - C1 -2CTZ 4.6 ?
21 PsiBlast_CBE 91.7955%-112 - C1 -2CTZ 4.6 ?
27 PsiBlast_CBE 89.3646%-114 - C1 -4OC9 - ? -
29 PsiBlast_CBE 89.1446%-114 - C1 -4OC9 - ? -
3 PsiBlast_PDB 89.0946%-114 - C1 -4OC9 - ? -
26 PsiBlast_CBE 88.9346%-114 - C1 -4OC9 - ? -
28 PsiBlast_CBE 88.6446%-112 - C1 -4OC9 - ? -
25 PsiBlast_CBE 87.7246%-118 - C1 -4OC9 - ? -
23 PsiBlast_CBE 87.4954%-115 - C1 -4KAM - ? -
107 HHSearch 85.6844%-117 - C1 -2RFV - ? -
24 PsiBlast_CBE 85.3754%-115 - C1 -4KAM - ? -
2 PsiBlast_PDB 84.6054%-115 - C1 -4KAM - ? -
22 PsiBlast_CBE 84.3054%-118 - C1 -4KAM - ? -
8 PsiBlast_PDB 83.6040%-119 - C1 -4OMA 6.0 ?
7 PsiBlast_PDB 83.2040%-119 - C1 -2RFV - ? -
10 PsiBlast_PDB 83.1540%-118 - C1 -3JWB 2.4 ?
9 PsiBlast_PDB 82.7540%-117 - C1 -3JWA 2.5 ?
4 PsiBlast_PDB 81.8941%-118 - C1 -4HF8 5.9 ?
47 PsiBlast_CBE 81.8141%-114 - C1 -1UKJ - MEGL_PSEPU -
11 PsiBlast_PDB 81.3340%-118 - C1 -3JW9 2.2 ?
5 PsiBlast_PDB 80.7240%-119 - C1 -3MKJ 4.8 ?
73 PsiBlast_CBE 76.5134%-109 - C1 -1E5F 3.6 ?
105 HHSearch 75.8538%-106 - C1 -1E5E 5.0 ?
75 PsiBlast_CBE 75.2334%-108 - C1 -1E5E 4.2 ?
74 PsiBlast_CBE 74.4934%-108 - C1 -1E5F 3.7 ?
76 PsiBlast_CBE 73.0334%-105 - C1 -1E5E 5.0 ?
115 HHSearch 72.5036%-117 * C1 *1PFF 2.0 ?