@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5034: (2016-03-03 )
MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPLDRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGYVMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHALLDKLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDGRRVPVILFTKGGGLWLESMAEVGAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYANPAAIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHAGAFFEAVHELSAQYHG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CP3_A_2(1R3W)
DCUP_HUMAN
[Raw transfer]



1CP_A_2(1R3S)
DCUP_HUMAN
[Raw transfer]



1CP_A_2(1R3S)
DCUP_HUMAN
[Raw transfer]



1CP_A_2(1R3Q)
DCUP_HUMAN
[Raw transfer]



CP3_A_2(1R3Y)
DCUP_HUMAN
[Raw transfer]



CP3_A_2(2Q71)
DCUP_HUMAN
[Raw transfer]



CP3_A_2(1R3T)
DCUP_HUMAN
[Raw transfer]



1CP_A_2(1R3V)
DCUP_HUMAN
[Raw transfer]



EDO_B_10(4ZR8)
?
[Raw transfer]



EDO_A_5(4ZR8)
?
[Raw transfer]
1 PsiBlast_PDB 99.35100%-117 - C6 -4WSH - DCUP_PSEAE -
21 PsiBlast_CBE 98.36100%-119 - C6 -4WSH - DCUP_PSEAE -
2 PsiBlast_PDB 90.9575%-114 - C6 -3CYV - DCUP_SHIFL -
4 PsiBlast_PDB 88.6262%-115 - C6 -4EXQ - DCUP_BURTA -
3 PsiBlast_PDB 88.2267%-111 - C6 -4ZR8 2.9 ?
22 PsiBlast_CBE 86.8867%-107 - C6 -4ZR8 2.0 ?
17 PsiBlast_PDB 83.7049%-111 - C6 -1R3V 8.0 DCUP_HUMAN
28 HHSearch 83.4248%-108 - C6 -1R3S 11.8 DCUP_HUMAN
48 Fugue 83.3547%-107 - C6 -1URO - DCUP_HUMAN -
20 PsiBlast_PDB 83.3449%-114 - C6 -2Q6Z - DCUP_HUMAN -
19 PsiBlast_PDB 83.3049%-113 - C6 -2Q71 11.6 DCUP_HUMAN
9 PsiBlast_PDB 83.3049%-112 - C6 -3GVQ - DCUP_HUMAN -
24 PsiBlast_CBE 83.2049%-110 - C6 -1R3S 11.8 DCUP_HUMAN
11 PsiBlast_PDB 82.9949%-110 - C6 -3GW3 - DCUP_HUMAN -
13 PsiBlast_PDB 82.9449%-114 - C6 -3GVV - DCUP_HUMAN -
7 PsiBlast_PDB 82.9149%-112 - C6 -1R3Q 11.1 DCUP_HUMAN
5 PsiBlast_PDB 82.8449%-111 - C6 -3GW0 - DCUP_HUMAN -
15 PsiBlast_PDB 82.7349%-111 - C6 -1R3W 10.4 DCUP_HUMAN
8 PsiBlast_PDB 82.6849%-110 - C6 -1R3Y 11.0 DCUP_HUMAN
23 PsiBlast_CBE 82.6649%-110 - C6 -1R3T 9.5 DCUP_HUMAN