@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5074: (2016-03-04 )
MIEVRNLLKVFDTRGQVVRAVDDVSTRVARGEVLVVIGPSGSGKSTFLRCLNGLEEFDEGSVSIDGVDLADPRTDINAYRREVGMVFQHFNLFPHMTVLENLCLAQRVVRKRGKAEREAKARALLAKVGIGQKADEYPSRLSGGQQQRVAIARALCMDPKVMLFDEPTSALDPEMVGEVLDVMKTLAVEGMTMVCVTHEMGFAREVADRVLFFDHGKLLEDAPPAQFFDNPQDPRAQAFLRQVL

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



ATP_C_3(1VCI)
?
[Raw transfer]
27 PsiBlast_CBE 97.2162%-119 - C1 -2OLK 5.9 ?
29 PsiBlast_CBE 96.9762%-120 - C1 -2OLK 5.8 ?
3 PsiBlast_PDB 96.8662%-120 - C1 -2OLK 5.7 ?
4 PsiBlast_PDB 96.8562%-123 - C1 -2OUK - ? -
2 PsiBlast_PDB 96.6762%-124 - C1 -2OLJ - ? -
25 PsiBlast_CBE 96.5662%-119 - C1 -2OUK - ? -
22 PsiBlast_CBE 96.1062%-123 - C1 -3C4J 5.0 ?
28 PsiBlast_CBE 96.0962%-119 - C1 -2OLK 6.0 ?
31 PsiBlast_CBE 95.4859%-115 - C1 -4U02 - ? -
21 PsiBlast_CBE 95.4062%-120 - C1 -3C41 5.9 ?
122 HHSearch 95.3563%-122 - C1 -2OLJ - ? -
1 PsiBlast_PDB 95.0862%-114 - C1 -3C41 - ? -
23 PsiBlast_CBE 95.0362%-119 - C1 -2Q0H 5.7 ?
6 PsiBlast_PDB 94.8462%-115 - C1 -3C4J 6.4 ?
5 PsiBlast_PDB 94.6262%-117 - C1 -2Q0H 5.4 ?
33 PsiBlast_CBE 94.1759%-118 - C1 -4U02 - ? -
24 PsiBlast_CBE 94.1062%-114 - C1 -2OUK - ? -
8 PsiBlast_PDB 94.0259%-117 - C1 -4U02 - ? -
30 PsiBlast_CBE 93.3462%-116 - C1 -2OLJ 5.8 ?
7 PsiBlast_PDB 93.3459%-119 - C1 -4U00 5.9 ?
12 PsiBlast_PDB 93.1657%-122 - C1 -4YMV 5.4 ?
35 PsiBlast_CBE 92.5657%-122 - C1 -4YMU 6.0 ?
34 PsiBlast_CBE 91.9557%-119 - C1 -4YMV 5.0 ?
11 PsiBlast_PDB 91.7957%-120 - C1 -4YMU 6.2 ?
14 PsiBlast_PDB 82.5053%-120 - C1 -1B0U 4.1 HISP_SALTY
48 PsiBlast_CBE 70.4837%-131 - C1 -3TIF 6.5 Y796_METJA
46 PsiBlast_CBE 69.0637%-132 - C1 -1L2T 6.7 Y796_METJA
47 PsiBlast_CBE 68.6837%-128 - C1 -1L2T 6.7 Y796_METJA
58 PsiBlast_CBE 68.1136%-111 - C1 -3FVQ 7.5 FBPC_NEIG1
49 PsiBlast_CBE 67.9637%-124 - C1 -3TIF 6.2 Y796_METJA
59 PsiBlast_CBE 67.2836%-112 - C1 -3FVQ 6.9 FBPC_NEIG1
50 PsiBlast_CBE 64.6035%-120 - C1 -1VCI 3.9 ?