@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5140: (2016-03-04 )
MALAKRIIPCLDVDNGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRSVQDIRNLLNAGADKVSINTAAVFNPEFVGEAADRFGSQCIVVAIDAKKVSAPGEAPRWEIFTHGGRKPTGLDAVLWAKKMEDLGAGEILLTSMDQDGVKSGYDLGVTRAISEAVNVPVIASGGVGNLEHLAAGILEGKADAVLAASIFHFGEYTVPEAKAYLASRGIVVR

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_5(1H5Y)
HIS6_PYRAE
[Raw transfer]



GOL_B_9(1H5Y)
HIS6_PYRAE
[Raw transfer]



GOL_A_6(1H5Y)
HIS6_PYRAE
[Raw transfer]



0VR_D_2(4EWN)
HIS6_THEMA
[Raw transfer]



1PR_B_4(1OX5)
HIS5_YEAST
[Raw transfer]



1PR_A_5(1OX5)
HIS5_YEAST
[Raw transfer]



POP_B_10(1OX4)
HIS5_YEAST
[Raw transfer]



POP_A_9(1OX4)
HIS5_YEAST
[Raw transfer]



POP_B_10(1JVN)
HIS5_YEAST
[Raw transfer]
21 PsiBlast_CBE 97.6672%-107 - C5 -4EVZ - ? -
95 HHSearch 92.5355%-102 - C5 -1THF - HIS6_THEMA -
25 PsiBlast_CBE 92.1453%-104 - C5 -2WJZ - HIS6_THEMA -
1 PsiBlast_PDB 92.1460% -97 - C5 -1KA9 - HIS6_THET8 -
8 PsiBlast_PDB 91.9353%-108 - C5 -4EWN 4.6 HIS6_THEMA
5 PsiBlast_PDB 91.7853%-102 - C5 -2WJZ - HIS6_THEMA -
6 PsiBlast_PDB 91.7053%-103 - C5 -1THF - HIS6_THEMA -
4 PsiBlast_PDB 91.6653%-104 - C5 -2A0N - HIS6_THEMA -
3 PsiBlast_PDB 90.8653%-103 - C5 -1VH7 - HIS6_THEMA -
2 PsiBlast_PDB 90.1955%-100 - C5 -1H5Y 2.9 HIS6_PYRAE
22 PsiBlast_CBE 89.9055% -98 - C5 -1H5Y 2.7 HIS6_PYRAE
113 Fugue 89.6153% -99 - C5 -1THF - HIS6_THEMA -
7 PsiBlast_PDB 89.2052% -99 - C5 -1GPW - HIS6_THEMA -
28 PsiBlast_CBE 88.8948%-102 - C5 -3IIP - ? -
27 PsiBlast_CBE 88.7952% -98 - C5 -1GPW - HIS6_THEMA -
31 PsiBlast_CBE 88.7048%-101 - C5 -3IIV - ? -
12 PsiBlast_PDB 88.4148%-100 - C5 -3IIV - ? -
29 PsiBlast_CBE 88.3848%-100 - C5 -3IIP - ? -
11 PsiBlast_PDB 88.2148% -99 - C5 -3IIP - ? -
24 PsiBlast_CBE 87.9453%-104 - C5 -3ZR4 - HIS6_THEMA -
33 PsiBlast_CBE 76.2537%-102 - C5 -1OX4 3.1 HIS5_YEAST
32 PsiBlast_CBE 55.0537% -26 - C5 -1OX5 1.7 HIS5_YEAST
15 PsiBlast_PDB 54.8837% -26 - C5 -1OX5 2.5 HIS5_YEAST
14 PsiBlast_PDB 53.5637% -29 - C5 -1OX4 3.2 HIS5_YEAST
34 PsiBlast_CBE 52.6137% -24 - C5 -1JVN 1.3 HIS5_YEAST