@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5150: (2016-03-05 )
MAERKTLLLTGASRGIGHATVKYFNAAGWRVFTASRQSWASECPWADGEENHIHLDLEDIPGVEASLELIREKLGDGRLHALVDNAGISPKGEGGERLGVLETDYATWLRVFNVNLFSTALLARGLFAELKAAQGTVINVTSIAGSKVHPFAGVAYATSKAALSALTREMAHDFGPHGVRVNAIAPGEIDTSILSPGTEEIVERSIPLHRLGRPEEIASLIYFLCTSGASYVNGAEIHVNGGQHV

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_B_9(4AG3)
FABG_PSEAE
[Raw transfer]



NDP_C_12(4AG3)
FABG_PSEAE
[Raw transfer]



NAP_B_19(3RSH)
FABG_VIBCH
[Raw transfer]



NAP_A_8(3RSH)
FABG_VIBCH
[Raw transfer]



NDP_A_5(4AG3)
FABG_PSEAE
[Raw transfer]



NDP_A_8(4I08)
FABG_VIBCH
[Raw transfer]



NDP_B_16(4I08)
FABG_VIBCH
[Raw transfer]



NAP_A_5(3TZC)
?
[Raw transfer]



NDP_D_8(4WK6)
?
[Raw transfer]



NDP_B_6(4WK6)
?
[Raw transfer]



GOL_A_4(4JIG)
?
[Raw transfer]



NDP_A_5(4WK6)
?
[Raw transfer]



EDO_A_7(4I08)
FABG_VIBCH
[Raw transfer]
1 PsiBlast_PDB 96.1364%-102 - C2 -4X54 - ? -
94 PsiBlast_CBE 78.3333% -95 - C2 -4NBT - ? -
95 PsiBlast_CBE 77.5133% -96 - C2 -4NBT - ? -
93 PsiBlast_CBE 77.4633% -94 - C2 -4NBT - ? -
113 HHSearch 76.1932%-103 - C2 -1FJH - DIDH_COMTE -
62 PsiBlast_CBE 75.8937% -91 - C2 -4BNV - FABG_PSEAE -
32 PsiBlast_CBE 75.8837% -94 - C2 -4BO6 - FABG_PSEAE -
50 PsiBlast_CBE 75.7137% -91 - C2 -4BNZ - FABG_PSEAE -
29 PsiBlast_CBE 75.2037% -94 - C2 -4BO7 - FABG_PSEAE -
14 PsiBlast_PDB 74.9637% -86 - C2 -4BNZ - FABG_PSEAE -
10 PsiBlast_PDB 74.8437% -92 - C2 -4BNV - FABG_PSEAE -
44 PsiBlast_CBE 74.7137% -89 - C2 -4BO2 - FABG_PSEAE -
25 PsiBlast_CBE 74.7037% -88 - C2 -4BO8 - FABG_PSEAE -
59 PsiBlast_CBE 74.6737% -89 - C2 -4BNW - FABG_PSEAE -
46 PsiBlast_CBE 74.6337% -89 - C2 -4BO0 - FABG_PSEAE -
43 PsiBlast_CBE 74.5837% -89 - C2 -4BO2 - FABG_PSEAE -
41 PsiBlast_CBE 74.2137% -89 - C2 -4BO3 - FABG_PSEAE -
61 PsiBlast_CBE 74.0837% -91 - C2 -4BNV - FABG_PSEAE -
28 PsiBlast_CBE 73.9237% -86 - C2 -4BO7 - FABG_PSEAE -
11 PsiBlast_PDB 73.8037% -85 - C2 -4BNW - FABG_PSEAE -
7 PsiBlast_PDB 72.7137% -74 - C2 -4AG3 11.9 FABG_PSEAE
82 PsiBlast_CBE 72.1433% -88 - C2 -4WK6 5.9 ?
80 PsiBlast_CBE 72.0533% -93 - C2 -4WK6 6.3 ?
70 PsiBlast_CBE 71.7237% -73 - C2 -4AG3 11.5 FABG_PSEAE
71 PsiBlast_CBE 71.5837% -72 - C2 -4AG3 11.8 FABG_PSEAE
88 PsiBlast_CBE 70.4533% -79 - C2 -4I08 11.6 FABG_VIBCH
89 PsiBlast_CBE 70.0233% -77 - C2 -3RSH 11.1 FABG_VIBCH
99 PsiBlast_CBE 69.9932% -97 - C2 -3TZC 4.9 ?
87 PsiBlast_CBE 69.9733% -77 - C2 -4I08 10.8 FABG_VIBCH
83 PsiBlast_CBE 68.3733% -85 - C2 -4WK6 4.4 ?
90 PsiBlast_CBE 67.9433% -81 - C2 -3RSH 11.3 FABG_VIBCH
102 PsiBlast_CBE 65.6435% -78 - C2 -4JIG 3.1 ?