@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5243: (2016-03-05 )
MSFTPANRAYPYTRLRRNRRDDFSRRLVRENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVALDPFTTHGQDGILDDDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGHTNVRIMAYSAKYASAYYGPFRDAVGSASNLGKGNKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKDEFRAPTFVYQVSGEYAMHMGAIQNGWLAESVILESLTAFKRAGADGILTYFAKQAAEQLRRGR

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PBG_A_3(1E51)
HEM2_HUMAN
[Raw transfer]




PBG_A_4(1OHL)
HEM2_YEAST
[Raw transfer]




SHF_A_5(1B4K)
HEM2_PSEAE
[Raw transfer]




SHF_A_5(1B4K)
HEM2_PSEAE
[Raw transfer]




PB1_A_5(1PV8)
HEM2_HUMAN
[Raw transfer]




PB1_A_5(1PV8)
HEM2_HUMAN
[Raw transfer]




DSB_B_6(2C1H)
HEM2_CHLP8
[Raw transfer]




DSB_A_7(1L6S)
HEM2_ECOLI
[Raw transfer]




DSB_A_7(1L6S)
HEM2_ECOLI
[Raw transfer]




DSB_B_8(1I8J)
HEM2_ECOLI
[Raw transfer]




4OX_A_2(1GJP)
HEM2_YEAST
[Raw transfer]




4OX_A_7(1L6Y)
HEM2_ECOLI
[Raw transfer]




SHU_A_2(1H7R)
HEM2_YEAST
[Raw transfer]




SHF_A_3(1W1Z)
HEM2_CHLP8
[Raw transfer]




DSB_A_7(1I8J)
HEM2_ECOLI
[Raw transfer]




KAH_A_2(1H7P)
HEM2_YEAST
[Raw transfer]




SHF_A_3(1W1Z)
HEM2_CHLP8
[Raw transfer]




SHF_A_8(1B4E)
HEM2_ECOLI
[Raw transfer]




SHF_A_2(1H7N)
HEM2_YEAST
[Raw transfer]




DSB_A_4(2C1H)
HEM2_CHLP8
[Raw transfer]




SHF_A_2(1H7N)
HEM2_YEAST
[Raw transfer]




SHF_B_5(1W1Z)
HEM2_CHLP8
[Raw transfer]




DSB_A_2(1EB3)
HEM2_YEAST
[Raw transfer]




SHF_A_3(1YLV)
HEM2_YEAST
[Raw transfer]




SHO_A_2(1W31)
HEM2_YEAST
[Raw transfer]




DAV_A_2(1H7O)
HEM2_YEAST
[Raw transfer]




3 PsiBlast_PDB 97.9099%-105 - C10 -1GZG - HEM2_PSEAE -
1 PsiBlast_PDB 97.90100%-106 - C10 -1B4K 3.7 HEM2_PSEAE
73 Fugue 97.0098%-108 - C10 -1B4K 3.7 HEM2_PSEAE
7 PsiBlast_PDB 96.2198% -88 - C- -1W5O - HEM2_PSEAE -
5 PsiBlast_PDB 95.8899% -87 - C- -1W5M - HEM2_PSEAE -
4 PsiBlast_PDB 95.8499% -88 - C- -1W56 - HEM2_PSEAE -
22 PsiBlast_CBE 95.5199% -94 - C- -1W56 - HEM2_PSEAE -
24 PsiBlast_CBE 95.1598% -93 - C- -1W5O - HEM2_PSEAE -
8 PsiBlast_PDB 95.0498% -93 - C- -1W5P - HEM2_PSEAE -
6 PsiBlast_PDB 95.0299% -93 - C- -1W5N - HEM2_PSEAE -
23 PsiBlast_CBE 94.9499% -93 - C- -1W5N - HEM2_PSEAE -
26 PsiBlast_CBE 94.9298% -96 - C- -1W5Q - HEM2_PSEAE -
25 PsiBlast_CBE 94.9298% -93 - C- -1W5P - HEM2_PSEAE -
21 PsiBlast_CBE 94.7499% -92 - C- -1W5M - HEM2_PSEAE -
49 HHSearch 85.0455%-103 - C10 -1W1Z 2.5 HEM2_CHLP8
2 PsiBlast_PDB 84.47100% -91 - C- -2WOQ - HEM2_PSEAE -
27 PsiBlast_CBE 83.8055%-104 - C10 -2C1H 1.7 HEM2_CHLP8
10 PsiBlast_PDB 83.7355%-104 - C10 -2C1H 2.3 HEM2_CHLP8
9 PsiBlast_PDB 83.5255%-103 - C10 -1W1Z 2.5 HEM2_CHLP8
28 PsiBlast_CBE 82.1355%-103 - C10 -1W1Z 2.4 HEM2_CHLP8
47 PsiBlast_CBE 78.1137% -87 - C10 -1H7O 2.5 HEM2_YEAST
14 PsiBlast_PDB 77.9943% -97 - C10 -1E51 3.5 HEM2_HUMAN
50 HHSearch 77.9436% -84 - C10 -1H7N 3.7 HEM2_YEAST
46 PsiBlast_CBE 77.7237% -87 - C10 -1H7N 3.7 HEM2_YEAST
20 PsiBlast_PDB 77.5238% -87 - C10 -1YLV 3.4 HEM2_YEAST
40 PsiBlast_CBE 77.3737% -86 - C10 -1W31 3.5 HEM2_YEAST
51 HHSearch 77.3640% -87 - C10 -1L6S 2.2 HEM2_ECOLI
45 PsiBlast_CBE 77.3137% -86 - C10 -1H7P 3.5 HEM2_YEAST
15 PsiBlast_PDB 77.3040% -83 - C10 -1B4E 3.7 HEM2_ECOLI
43 PsiBlast_CBE 77.1637% -85 - C10 -1OHL 3.7 HEM2_YEAST
44 PsiBlast_CBE 77.0837% -88 - C10 -1H7R 2.9 HEM2_YEAST
18 PsiBlast_PDB 76.8740% -88 - C10 -1L6Y 3.6 HEM2_ECOLI
17 PsiBlast_PDB 76.5340% -83 - C10 -1L6S 2.2 HEM2_ECOLI
16 PsiBlast_PDB 76.5340% -83 - C10 -1I8J 2.4 HEM2_ECOLI
39 PsiBlast_CBE 76.4937% -86 - C10 -1EB3 2.6 HEM2_YEAST
38 PsiBlast_CBE 76.1837% -84 - C10 -1GJP 2.4 HEM2_YEAST
37 PsiBlast_CBE 76.1740% -79 - C10 -1I8J 3.5 HEM2_ECOLI
53 HHSearch 73.4442%-113 * C10 *1PV8 1.9 HEM2_HUMAN
13 PsiBlast_PDB 73.0843%-117 - C10 -1PV8 1.9 HEM2_HUMAN