@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5321: (2016-03-06 )
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH

Atome Classification :

(71 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DUP_B_7(4OOP)
DUT_ARATH
[Raw transfer]




DUD_B_9(3C3I)
?
[Raw transfer]




DUD_B_6(1Q5H)
DUT_HUMAN
[Raw transfer]




DUP_C_12(3EHW)
DUT_HUMAN
[Raw transfer]




DUD_A_5(1Q5H)
DUT_HUMAN
[Raw transfer]




DUP_C_11(2HQU)
DUT_HUMAN
[Raw transfer]




UMP_C_9(3F4F)
DUT_YEAST
[Raw transfer]




UMP_C_9(3F4F)
DUT_YEAST
[Raw transfer]




DUT_C_7(1SMC)
DUT_MYCTU
[Raw transfer]




DUT_C_8(1SM8)
DUT_MYCTU
[Raw transfer]




UMP_B_6(3F4F)
DUT_YEAST
[Raw transfer]




DUP_B_10(2HQU)
DUT_HUMAN
[Raw transfer]




UMP_A_4(3F4F)
DUT_YEAST
[Raw transfer]




DUT_A_6(1SMC)
DUT_MYCTU
[Raw transfer]




DUP_B_8(4OOP)
DUT_ARATH
[Raw transfer]




UMP_C_5(2OL1)
?
[Raw transfer]




DUT_C_5(1SMC)
DUT_MYCTU
[Raw transfer]




DUT_C_10(1SM8)
DUT_MYCTU
[Raw transfer]




DUP_A_9(1SJN)
DUT_MYCTU
[Raw transfer]




DUT_B_9(1SM8)
DUT_MYCTU
[Raw transfer]




DUD_B_9(1SLH)
DUT_MYCTU
[Raw transfer]




UMP_C_5(2OL1)
?
[Raw transfer]




DUP_C_8(2OKE)
?
[Raw transfer]




DUP_A_8(3EHW)
DUT_HUMAN
[Raw transfer]




DUP_B_11(1SJN)
DUT_MYCTU
[Raw transfer]




DUP_B_10(1SJN)
DUT_MYCTU
[Raw transfer]




DUP_Y_18(3EHW)
DUT_HUMAN
[Raw transfer]




DUP_Z_20(3EHW)
DUT_HUMAN
[Raw transfer]




DUP_A_3(1SIX)
DUT_MYCTU
[Raw transfer]




DUP_B_11(3EHW)
DUT_HUMAN
[Raw transfer]




EDO_A_8(3MBQ)
DUT_BRUA2
[Raw transfer]




DUP_B_11(1SJN)
DUT_MYCTU
[Raw transfer]




UMP_C_5(2OL1)
?
[Raw transfer]




DUD_C_7(1SLH)
DUT_MYCTU
[Raw transfer]




DUP_A_4(3P48)
DUT_YEAST
[Raw transfer]




DUP_B_7(2OKE)
?
[Raw transfer]




UMP_C_5(2OL1)
?
[Raw transfer]




UMP_A_10(1SNF)
DUT_MYCTU
[Raw transfer]




DUD_B_7(2OL0)
?
[Raw transfer]




DUD_A_8(1SLH)
DUT_MYCTU
[Raw transfer]




DUP_A_6(2OKE)
?
[Raw transfer]




UMP_B_11(1SNF)
DUT_MYCTU
[Raw transfer]




GOL_A_4(3LOJ)
DUT_MYCTU
[Raw transfer]




UMP_C_12(1SNF)
DUT_MYCTU
[Raw transfer]




DUD_C_6(2OL0)
?
[Raw transfer]




DUD_C_8(2OL0)
?
[Raw transfer]




EDO_B_9(2OKB)
?
[Raw transfer]




EDO_B_7(2OKD)
?
[Raw transfer]




EDO_A_6(2OKD)
?
[Raw transfer]




DUD_B_8(3C3I)
?
[Raw transfer]




MKH_B_6(3ARA)
DUT_HUMAN
[Raw transfer]




DUD_B_10(3C3I)
?
[Raw transfer]




DU3_C_9(3T64)
?
[Raw transfer]




132 HHSearch 95.5767%-150 - C4 -3TQZ - DUT_COXBU -
7 PsiBlast_PDB 95.1466%-150 - C4 -3TQZ - DUT_COXBU -
4 PsiBlast_PDB 94.5070%-155 - C4 -2HR6 - DUT_ECOLI -
121 Fugue 93.8370%-154 - C4 -1DUP - DUT_ECOLI -
3 PsiBlast_PDB 93.6270%-158 - C4 -1DUD - DUT_ECOLI -
2 PsiBlast_PDB 93.3070%-153 - C4 -1EU5 - DUT_ECOLI -
1 PsiBlast_PDB 93.1070%-156 - C4 -1DUP - DUT_ECOLI -
5 PsiBlast_PDB 92.9670%-156 - C4 -2HRM - DUT_ECOLI -
6 PsiBlast_PDB 92.1669%-152 - C4 -1SYL - DUT_ECOLI -
8 PsiBlast_PDB 87.9867%-159 - C4 -4LHR - DUT_BURTA -
23 PsiBlast_CBE 77.8737%-154 - C4 -3C3I Error ?
21 PsiBlast_CBE 77.4949%-170 - C4 -3MBQ 2.7 DUT_BRUA2
136 HHSearch 76.3940%-141 - C4 -3HZA - DUT_MYCTU -
145 HHSearch 76.2735%-146 - C4 -3ZF6 - ? -
135 HHSearch 76.2547%-159 - C4 -3MDX - DUT_BRUA2 -
10 PsiBlast_PDB 75.3849%-167 - C4 -3MDX - DUT_BRUA2 -
12 PsiBlast_PDB 75.2437%-157 - C4 -3C3I - ? -
146 HHSearch 75.2039%-154 - C4 -3CA9 - ? -
134 HHSearch 75.1039%-154 - C4 -3C2T - ? -
16 PsiBlast_PDB 74.5136%-154 - C4 -3C2T - ? -
29 PsiBlast_CBE 74.1040%-161 - C4 -4OOP 4.1 DUT_ARATH
133 HHSearch 73.7640%-150 - C4 -1SJN 3.3 DUT_MYCTU
20 PsiBlast_PDB 73.5135%-147 - C4 -2HQU 3.5 DUT_HUMAN
48 PsiBlast_CBE 72.7235%-145 - C4 -2HQU 3.6 DUT_HUMAN
109 PsiBlast_CBE 71.6538%-139 - C4 -1SIX 3.2 DUT_MYCTU
115 PsiBlast_CBE 71.6038%-138 - C4 -1SJN 3.3 DUT_MYCTU
99 PsiBlast_CBE 71.5938%-138 - C4 -1SNF 3.6 DUT_MYCTU
102 PsiBlast_CBE 71.5838%-137 - C4 -1SMC 2.5 DUT_MYCTU
40 PsiBlast_CBE 71.0335%-142 - C4 -3EHW 4.3 DUT_HUMAN
41 PsiBlast_CBE 70.9535%-143 - C4 -3EHW 4.4 DUT_HUMAN
107 PsiBlast_CBE 70.9438%-139 - C4 -1SLH 3.2 DUT_MYCTU
144 HHSearch 70.7735%-142 - C4 -3F4F 2.4 DUT_YEAST
35 PsiBlast_CBE 70.7735%-149 - C4 -1Q5H 3.1 DUT_HUMAN
25 PsiBlast_CBE 70.6037%-150 - C4 -3C3I 3.1 ?
24 PsiBlast_CBE 70.5337%-148 - C4 -3C3I 3.0 ?
39 PsiBlast_CBE 70.5035%-141 - C4 -3EHW 4.2 DUT_HUMAN
105 PsiBlast_CBE 70.4838%-142 - C4 -1SM8 3.5 DUT_MYCTU
36 PsiBlast_CBE 70.3335%-140 - C4 -3EHW 4.2 DUT_HUMAN
113 PsiBlast_CBE 70.2438%-138 - C4 -1SJN 3.3 DUT_MYCTU
111 PsiBlast_CBE 70.2238%-130 - C4 -3LOJ 2.1 DUT_MYCTU
34 PsiBlast_CBE 70.1435%-151 - C4 -1Q5H 3.6 DUT_HUMAN
13 PsiBlast_PDB 69.7840%-165 - C4 -4OOP Error DUT_ARATH
37 PsiBlast_CBE 69.7435%-139 - C4 -3EHW 4.2 DUT_HUMAN
142 HHSearch 69.5632%-118 - C4 -3T64 3.6 ?
108 PsiBlast_CBE 69.0938%-136 - C4 -1SLH 2.9 DUT_MYCTU
101 PsiBlast_CBE 68.8438%-133 - C4 -1SMC 3.1 DUT_MYCTU
85 PsiBlast_CBE 68.7437%-151 - C4 -2OL0 3.2 ?
104 PsiBlast_CBE 68.6538%-142 - C4 -1SM8 3.4 DUT_MYCTU
106 PsiBlast_CBE 68.2338%-145 - C4 -1SLH 3.3 DUT_MYCTU
114 PsiBlast_CBE 68.2138%-133 - C4 -1SJN 2.5 DUT_MYCTU
98 PsiBlast_CBE 68.0038%-131 - C4 -1SNF 3.8 DUT_MYCTU
91 PsiBlast_CBE 67.6837%-148 - C4 -2OKD 2.7 ?
100 PsiBlast_CBE 67.1138%-143 - C4 -1SMC 2.4 DUT_MYCTU
81 PsiBlast_CBE 66.9037%-156 - C4 -2OL1 4.8 ?
82 PsiBlast_CBE 66.6337%-151 - C4 -2OL1 4.5 ?
139 HHSearch 66.5735%-142 * C4 *2OL1 3.8 ?
141 HHSearch 66.4735%-145 - C4 -3P48 2.9 DUT_YEAST
80 PsiBlast_CBE 66.4537%-152 - C4 -2OL1 5.4 ?
84 PsiBlast_CBE 65.7737%-152 - C4 -2OL0 3.1 ?
94 PsiBlast_CBE 65.5337%-148 - C4 -2OKB 3.0 ?
79 PsiBlast_CBE 65.4234%-113 - C4 -3F4F 2.4 DUT_YEAST
83 PsiBlast_CBE 65.3237%-151 - C4 -2OL0 3.4 ?
97 PsiBlast_CBE 65.0638%-135 - C4 -1SNF 2.7 DUT_MYCTU
88 PsiBlast_CBE 65.0037%-150 - C4 -2OKE 2.9 ?
77 PsiBlast_CBE 64.8734%-109 - C4 -3F4F 2.5 DUT_YEAST
103 PsiBlast_CBE 64.3338%-134 - C4 -1SM8 3.4 DUT_MYCTU
87 PsiBlast_CBE 63.6537%-144 - C4 -2OKE 3.2 ?
86 PsiBlast_CBE 63.4737%-150 - C4 -2OKE 4.4 ?
89 PsiBlast_CBE 63.3537%-148 - C4 -2OKD 2.8 ?
78 PsiBlast_CBE 61.6134%-108 - C4 -3F4F 2.5 DUT_YEAST
137 HHSearch 60.2533%-130 - C4 -3ARA 2.8 DUT_HUMAN