@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5436: (2016-03-07 )
MIKKILIANRGEIAVRIVRACAEMGIRSVAVYSEADRHALHVKRADEAHSIGADPLAGYLNPRALVNLAVESGCDALHPGYGFLSENAELAEICAERGIKFIGPSAQVIRRMGDKTEARRSMIAAGVPCTPGTEGNVADLAEALREAERIGYPVMLKATSGGGGRGIRRCNSREELEQAFPRVISEATKAFGSAEVFLEKCIVNPKHIEAQILADSFGNTVHLFERDCSIQRRNQKLIEIAPSPQLTPEQRAYIGDLAVRAAKAVGYENAGTVEFLLADGEVYFMEMNTRVQVEHTITEEITGIDVVREQIRIASGLELSVKQDDIVHRGYALQFRINAEDPKNNFLPSFGKITRYYAPGGPGVRTDTAIYTGYTIPPYYDSMCLKLIVWALTWEEALDRGLRALDDMRVQGVKTTAPYYQEILRNPEFRSGQFNTSFVESHPELTQYSIKRNPSHLAIAIATAIAAHAGL

Atome Classification :

(50 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_4(3RUP)
ACCC_ECOLI
[Raw transfer]



ADP_A_8(3OUZ)
?
[Raw transfer]



ANP_A_3(2VPQ)
?
[Raw transfer]



ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]



ANP_A_3(2VPQ)
?
[Raw transfer]



ADP_A_4(3RV3)
ACCC_ECOLI
[Raw transfer]



ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]



ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]



ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]



ADP_B_8(2J9G)
ACCC_ECOLI
[Raw transfer]



AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]



ANP_B_7(2VPQ)
?
[Raw transfer]



ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]



ADP_B_4(3G8D)
ACCC_ECOLI
[Raw transfer]



ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]



ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]



LZL_A_3(2V5A)
ACCC_ECOLI
[Raw transfer]



OA2_A_3(2W6N)
ACCC_ECOLI
[Raw transfer]



GOL_A_5(3VA7)
?
[Raw transfer]



LZJ_B_5(2V58)
ACCC_ECOLI
[Raw transfer]



GOL_A_5(3VA7)
?
[Raw transfer]



LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]



LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]



OA2_B_5(2W6N)
ACCC_ECOLI
[Raw transfer]



L23_A_4(2W71)
ACCC_ECOLI
[Raw transfer]



OA4_A_3(2W6P)
ACCC_ECOLI
[Raw transfer]



LZJ_A_3(2V58)
ACCC_ECOLI
[Raw transfer]



GOL_A_5(3VA7)
?
[Raw transfer]



JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]



JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]



L22_A_3(2W70)
ACCC_ECOLI
[Raw transfer]



JZK_B_4(3JZF)
ACCC_ECOLI
[Raw transfer]



L23_C_6(2W71)
ACCC_ECOLI
[Raw transfer]



L22_B_5(2W70)
ACCC_ECOLI
[Raw transfer]



OA5_B_5(2W6Q)
ACCC_ECOLI
[Raw transfer]



OA1_B_5(2W6M)
ACCC_ECOLI
[Raw transfer]



OA5_A_3(2W6Q)
ACCC_ECOLI
[Raw transfer]



OA1_A_3(2W6M)
ACCC_ECOLI
[Raw transfer]



L21_A_3(2W6Z)
ACCC_ECOLI
[Raw transfer]



ADP_A_3(4RZQ)
ACCC_HAEIN
[Raw transfer]



ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]



ADP_A_3(3RV3)
ACCC_ECOLI
[Raw transfer]



OA3_C_5(2W6O)
ACCC_ECOLI
[Raw transfer]



OA3_A_3(2W6O)
ACCC_ECOLI
[Raw transfer]



ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]
1 PsiBlast_PDB 91.1955% -94 - C1 -1ULZ - ? -
120 HHSearch 91.0556% -91 - C1 -1ULZ - ? -
2 PsiBlast_PDB 89.7354% -86 - C1 -2VPQ 6.9 ?
122 HHSearch 89.5247% -88 - C1 -3OUZ 6.8 ?
117 HHSearch 89.4555% -83 - C1 -2VPQ 7.0 ?
21 PsiBlast_CBE 88.9654% -87 - C1 -2VPQ 6.2 ?
3 PsiBlast_PDB 88.6650% -93 - C1 -2DZD - ? -
119 HHSearch 88.3151% -91 - C1 -2DZD - ? -
66 PsiBlast_CBE 87.6751% -92 - C1 -2W6O 3.7 ACCC_ECOLI
56 PsiBlast_CBE 87.6451% -94 - C1 -2W71 5.8 ACCC_ECOLI
69 PsiBlast_CBE 87.3351% -90 - C1 -2W6M 3.3 ACCC_ECOLI
74 PsiBlast_CBE 86.8351% -90 - C1 -2V5A 4.5 ACCC_ECOLI
67 PsiBlast_CBE 86.7851% -90 - C1 -2W6N 4.5 ACCC_ECOLI
57 PsiBlast_CBE 86.6451% -91 - C1 -2W71 5.8 ACCC_ECOLI
62 PsiBlast_CBE 86.6051% -90 - C1 -2W6Q 4.3 ACCC_ECOLI
85 PsiBlast_CBE 86.5951% -91 - C1 -3G8D 3.8 ACCC_ECOLI
84 PsiBlast_CBE 86.3951% -87 - C1 -3RV4 7.5 ACCC_ECOLI
29 PsiBlast_CBE 86.2449% -90 - C1 -3HB9 - ? -
89 PsiBlast_CBE 86.1348% -95 - C1 -2C00 - ACCC_PSEAE -
72 PsiBlast_CBE 86.0851% -90 - C1 -2VR1 4.6 ACCC_ECOLI
65 PsiBlast_CBE 86.0351% -91 - C1 -2W6O 3.8 ACCC_ECOLI
63 PsiBlast_CBE 86.0051% -89 - C1 -2W6Q 3.5 ACCC_ECOLI
77 PsiBlast_CBE 85.9151% -89 - C1 -2V58 5.2 ACCC_ECOLI
75 PsiBlast_CBE 85.8751% -90 - C1 -2V59 5.0 ACCC_ECOLI
58 PsiBlast_CBE 85.8751% -89 - C1 -2W70 3.1 ACCC_ECOLI
82 PsiBlast_CBE 85.4851% -87 - C1 -1DV2 4.1 ACCC_ECOLI
61 PsiBlast_CBE 85.3651% -90 - C1 -2W6Z 4.0 ACCC_ECOLI
68 PsiBlast_CBE 85.3351% -89 - C1 -2W6N 4.5 ACCC_ECOLI
79 PsiBlast_CBE 85.3151% -92 * C1 *2J9G 6.4 ACCC_ECOLI
76 PsiBlast_CBE 85.3051% -89 - C1 -2V59 4.5 ACCC_ECOLI
49 PsiBlast_CBE 85.3051% -89 - C1 -3G8C 5.4 ACCC_ECOLI
59 PsiBlast_CBE 85.2251% -88 - C1 -2W70 3.4 ACCC_ECOLI
47 PsiBlast_CBE 85.2150% -87 - C1 -3JZI 7.7 ACCC_ECOLI
51 PsiBlast_CBE 85.1051% -87 - C1 -3RUP 6.8 ACCC_ECOLI
83 PsiBlast_CBE 84.9051% -89 - C1 -1DV2 4.9 ACCC_ECOLI
80 PsiBlast_CBE 84.8851% -91 - C1 -2J9G 4.7 ACCC_ECOLI
78 PsiBlast_CBE 84.8551% -88 - C1 -2V58 5.5 ACCC_ECOLI
87 PsiBlast_CBE 84.7448% -89 - C1 -2VQD 6.1 ACCC_PSEAE
50 PsiBlast_CBE 84.3451% -88 - C1 -3RV3 6.3 ACCC_ECOLI
19 PsiBlast_PDB 84.3451% -89 - C1 -3RV3 7.6 ACCC_ECOLI
16 PsiBlast_PDB 84.3150% -88 - C1 -3JZI 7.7 ACCC_ECOLI
48 PsiBlast_CBE 84.2750% -88 - C1 -3JZF 8.3 ACCC_ECOLI
70 PsiBlast_CBE 84.2051% -87 - C1 -2W6M 3.6 ACCC_ECOLI
64 PsiBlast_CBE 84.1751% -90 - C1 -2W6P 4.5 ACCC_ECOLI
17 PsiBlast_PDB 83.8751% -86 - C1 -3G8C 5.5 ACCC_ECOLI
18 PsiBlast_PDB 83.0551% -86 - C1 -3RUP 7.8 ACCC_ECOLI
14 PsiBlast_PDB 82.2652% -90 - C1 -4RZQ 4.0 ACCC_HAEIN
105 Fugue 73.0835% -83 - C1 -3VA7 2.1 ?
118 HHSearch 71.2538% -85 - C1 -3VA7 2.1 ?
102 PsiBlast_CBE 70.6838% -84 - C1 -3VA7 2.1 ?