@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5490: (2016-03-08 )
MNKLLVSLLLTLGLTGLAHAAGDAAAGQAKAAVCGACHGADGNSPAPNFPKLAGQGERYLLKQMHDIKDGKRTVLEMTGLLTNLSDQDLADIAAYFASQKMSVGMADPNLVAQGEALFRGGKIAEGMPACTGCHSPSGVGIATAGFPHLGGQHATYVAKQLTDFREGTRTNDGDTKIMQSIAAKLSNKDIAAISSYIQGLH

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_A_4(1ETP)
CYC4_PSEST
[Raw transfer]



HEC_A_6(1M70)
CYC4_PSEST
[Raw transfer]



HEM_B_6(1ETP)
CYC4_PSEST
[Raw transfer]



HEC_A_6(1M70)
CYC4_PSEST
[Raw transfer]



HEC_D_12(1M6Z)
CYC4_PSEST
[Raw transfer]



HEC_D_12(1M70)
CYC4_PSEST
[Raw transfer]



HEC_A_6(1M6Z)
CYC4_PSEST
[Raw transfer]



HEC_C_9(1M6Z)
CYC4_PSEST
[Raw transfer]



HEC_C_9(1M70)
CYC4_PSEST
[Raw transfer]



HEM_A_7(4O1W)
?
[Raw transfer]



HEM_B_5(1ETP)
CYC4_PSEST
[Raw transfer]



HEC_D_11(1M6Z)
CYC4_PSEST
[Raw transfer]



HEM_B_5(1ETP)
CYC4_PSEST
[Raw transfer]



HEM_B_8(4O1W)
?
[Raw transfer]



HEM_D_11(4O1W)
?
[Raw transfer]



HEM_F_15(4O1W)
?
[Raw transfer]



HEC_D_11(1M70)
CYC4_PSEST
[Raw transfer]



HEC_C_10(1M6Z)
CYC4_PSEST
[Raw transfer]



HEM_E_13(4O1W)
?
[Raw transfer]



HEC_C_10(1M70)
CYC4_PSEST
[Raw transfer]



HEM_C_10(4O1W)
?
[Raw transfer]
70 HHSearch 91.4977% -62 - C1 -1M70 10.4 CYC4_PSEST
3 PsiBlast_PDB 90.1875% -57 - C1 -1M70 10.4 CYC4_PSEST
27 PsiBlast_CBE 90.1475% -55 - C1 -1ETP 9.5 CYC4_PSEST
24 PsiBlast_CBE 89.8875% -53 - C1 -1M6Z 10.8 CYC4_PSEST
95 Fugue 89.8679% -55 - C1 -1ETP 2.9 CYC4_PSEST
26 PsiBlast_CBE 89.8075% -55 - C1 -1M6Z 3.0 CYC4_PSEST
1 PsiBlast_PDB 89.5975% -54 - C1 -1ETP 9.3 CYC4_PSEST
2 PsiBlast_PDB 89.5075% -56 - C1 -1M6Z 10.7 CYC4_PSEST
21 PsiBlast_CBE 89.4875% -54 - C1 -1M70 10.8 CYC4_PSEST
25 PsiBlast_CBE 89.2775% -56 - C1 -1M6Z 9.8 CYC4_PSEST
22 PsiBlast_CBE 89.1775% -54 - C1 -1M70 10.1 CYC4_PSEST
23 PsiBlast_CBE 89.1575% -55 - C1 -1M70 3.0 CYC4_PSEST
33 PsiBlast_CBE 66.7031% -59 - C1 -1H1O - CY552_ACIFR -
5 PsiBlast_PDB 65.9531% -57 - C1 -1H1O - CY552_ACIFR -
72 HHSearch 65.5532% -65 - C1 -1H1O - CY552_ACIFR -
71 HHSearch 61.2327% -69 - C1 -3VRD - ? -
62 PsiBlast_CBE 59.9751% -61 - C1 -1CNO - CY552_MARHY -
64 PsiBlast_CBE 59.7251% -54 - C1 -1CNO - CY552_MARHY -
59 PsiBlast_CBE 59.6051% -57 - C1 -1CNO - CY552_MARHY -
61 PsiBlast_CBE 59.5851% -58 - C1 -1CNO - CY552_MARHY -
30 PsiBlast_CBE 58.7653% -49 - C1 -4O1W 3.7 ?
31 PsiBlast_CBE 58.6653% -57 - C1 -4O1W 3.7 ?
32 PsiBlast_CBE 58.4953% -55 - C1 -4O1W 3.8 ?
28 PsiBlast_CBE 58.4053% -53 - C1 -4O1W 3.5 ?
4 PsiBlast_PDB 57.3653% -53 - C1 -4O1W 3.8 ?
29 PsiBlast_CBE 57.2953% -49 - C1 -4O1W 3.6 ?