@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5493: (2016-03-08 )
MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFDAKGPTFRDELFAEYKANRPSMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLARSSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSRLDVDGVKEKFGVGPELIIDFLALMGDKVDNIPGVPGVGEKTALGLLTGVGGGLEVLYASLDKVPELPIRGAKGLPAKLEENREQAFLSYQLATIKTDVELDVEIDKLYPGEPQREALIALYRELEFKNWLDDLLREAKEAGENGEAETPIQAEVDYDVVLDQAGFDAWLKKLEEAELIAFDTETTSIDAQQAQVVGVSFAVKEGEAAYVPLAHSYMGVPEQLDRDAVLRALKPLLEDPKKLKVGQHAKYDINVLANASTPIALRGVAYDTMLESYVLDSTATRHDMDSLALKYLGHSTIRFEDIAGKGAKQLTFDQIAIEQAGPYAAEDADVTLRLHQALWQKLEAIPSLARVLTDIEMPLVPVLARIERNGALVDANLLGIQSRELGEKMVALERQAYDLAGQEFNLGSPKQLGAILYDKLGLPVLSKTATGQPSTAEAVLAELAEQDFELPKVIMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPQGYKLLAADYSQIELRIMAHLAKDDGLLDAFRHDLDVHRATAAEVFGVPLEDVSGDQRRSAKAINFGLIYGMSAFGLAKQIGVERKEAQAYIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPEIHSKNGAMRKAAERTAINAPMQGTAADIMKRAMVAVDNWLQESGLDARVILQVHDELVLEVREDLVEQVCEGIRPLMSGAATLDVPLVVEAGVGSNWDEAH

Atome Classification :

(98 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_F_4(1LV5)
DPO1_GEOSE
[Raw transfer]
-
DG3_P_8(1T7P)
DPOL_BPT7
[Raw transfer]



TTP_A_9(1NJY)
DPO1_GEOSE
[Raw transfer]



GOL_A_5(4DWI)
?
[Raw transfer]



AF_C_7(1UA0)
?
[Raw transfer]



GOL_A_5(4DSI)
?
[Raw transfer]



NACID_F_6(3PV8)
?
[Raw transfer]
-
NACID_F_6(4F2S)
?
[Raw transfer]
-
NACID_F_6(3TI0)
?
[Raw transfer]
-
NACID_F_6(3PX4)
?
[Raw transfer]
-
NACID_F_6(3PX6)
?
[Raw transfer]
-
NACID_F_6(3THV)
?
[Raw transfer]
-
NACID_F_6(3PX0)
?
[Raw transfer]
-
NACID_F_6(4F2R)
?
[Raw transfer]
-
NACID_F_6(4EZ6)
?
[Raw transfer]
-
NACID_F_6(4EZ9)
?
[Raw transfer]
-
NACID_F_6(4F3O)
?
[Raw transfer]
-
NACID_F_6(4DSF)
?
[Raw transfer]
-
NACID_F_6(4F8R)
?
[Raw transfer]
-
NACID_F_6(4DSE)
?
[Raw transfer]
-
NACID_F_6(4F4K)
?
[Raw transfer]
-
MES_I_9(1NK0)
DPO1_GEOSE
[Raw transfer]



BAP_C_10(1XC9)
DPO1_GEOSE
[Raw transfer]



NACID_C_3(4DSL)
?
[Raw transfer]
-
NACID_C_3(4B9T)
?
[Raw transfer]
-
NACID_C_3(4B9L)
?
[Raw transfer]
-
CHAIN_C_2(1NK6)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(4B9M)
?
[Raw transfer]
-
CHAIN_C_2(1U47)
DPO1_GEOSE
[Raw transfer]
-
NACID_B_1(1D9D)
DPO1_ECOLI
[Raw transfer]
-
CHAIN_C_2(1U48)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_C_2(1NKC)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(2XO7)
?
[Raw transfer]
-
NACID_C_2(1L5U)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_C_2(1U4B)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(2HHU)
?
[Raw transfer]
-
NACID_B_1(1KRP)
DPO1_ECOLI
[Raw transfer]
-
CHAIN_C_2(1NJX)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(2HW3)
?
[Raw transfer]
-
CHAIN_C_2(1NKE)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_C_2(1NK5)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(1L3U)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(2XY6)
?
[Raw transfer]
-
CHAIN_C_2(1NKB)
DPO1_GEOSE
[Raw transfer]
-
NACID_F_2(2HHW)
?
[Raw transfer]
-
NACID_C_2(2HHQ)
?
[Raw transfer]
-
NACID_B_1(1KSP)
DPO1_ECOLI
[Raw transfer]
-
CHAIN_C_2(1U49)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_C_2(1NK7)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(4UQG)
?
[Raw transfer]
-
CHAIN_C_2(1NK4)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(2HHX)
DPO1_BACCA
[Raw transfer]
-
NACID_T_2(2BDP)
DPO1_GEOSE
[Raw transfer]
-
NACID_B_1(1KLN)
DPO1_ECOLI
[Raw transfer]
-
CHAIN_C_2(1NJZ)
DPO1_GEOSE
[Raw transfer]
-
NACID_P_1(3BDP)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(1L3V)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_C_2(1U45)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(4O0I)
?
[Raw transfer]
-
NACID_C_3(4B9N)
?
[Raw transfer]
-
SUC_A_6(1NK8)
DPO1_GEOSE
[Raw transfer]



CHAIN_C_2(1NJY)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(2HHT)
?
[Raw transfer]
-
NACID_C_3(2XY5)
?
[Raw transfer]
-
NACID_C_2(1L3T)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(4B9V)
?
[Raw transfer]
-
SUC_A_6(1NJX)
DPO1_GEOSE
[Raw transfer]



CHAIN_C_2(1NJW)
?
[Raw transfer]
-
NACID_P_2(4XVK)
DPOLN_HUMAN
[Raw transfer]
-
NACID_C_4(3HP6)
?
[Raw transfer]
-
NACID_C_2(1L3S)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(2HHS)
?
[Raw transfer]
-
NACID_C_3(2XY7)
?
[Raw transfer]
-
CHAIN_B_2(4DSI)
?
[Raw transfer]
-
CHAIN_C_2(1XC9)
DPO1_GEOSE
[Raw transfer]
-
NACID_B_1(1D9F)
DPO1_ECOLI
[Raw transfer]
-
NACID_B_1(2KZM)
DPO1_ECOLI
[Raw transfer]
-
CHAIN_C_3(4DSJ)
?
[Raw transfer]
-
CHAIN_B_1(1D8Y)
DPO1_ECOLI
[Raw transfer]
-
NACID_B_1(2KZZ)
DPO1_ECOLI
[Raw transfer]
-
CHAIN_C_2(1UA0)
?
[Raw transfer]
-
NACID_F_4(1LV5)
DPO1_GEOSE
[Raw transfer]
-
NACID_F_6(3HP6)
?
[Raw transfer]
-
CHAIN_C_2(1NK8)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(2HHV)
?
[Raw transfer]
-
NACID_C_3(4B9U)
?
[Raw transfer]
-
NACID_B_1(2KFN)
DPO1_ECOLI
[Raw transfer]
-
NACID_B_1(1QSL)
DPO1_ECOLI
[Raw transfer]
-
NACID_C_4(2HHW)
?
[Raw transfer]
-
NACID_C_3(3EYZ)
DPO1_GEOSE
[Raw transfer]
-
NACID_B_1(2KFZ)
DPO1_ECOLI
[Raw transfer]
-
CHAIN_C_2(1NK9)
DPO1_GEOSE
[Raw transfer]
-
NACID_B_1(2KFN)
DPO1_ECOLI
[Raw transfer]
-
NACID_T_2(4BDP)
DPO1_GEOSE
[Raw transfer]
-
NACID_B_1(2KFZ)
DPO1_ECOLI
[Raw transfer]
-
NACID_C_2(4DSK)
?
[Raw transfer]
-
CHAIN_E_5(4DSJ)
?
[Raw transfer]
-
CHAIN_C_2(1NK0)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(4B9S)
?
[Raw transfer]
-
CHAIN_C_2(1UA1)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(4DWI)
?
[Raw transfer]
-
NACID_F_4(4X0Q)
DPOLQ_HUMAN
[Raw transfer]
-
4 PsiBlast_PDB 94.8963% -87 - C4 -1KRP 10.9 DPO1_ECOLI
11 PsiBlast_PDB 94.8563% -90 - C4 -1D9D 4.8 DPO1_ECOLI
7 PsiBlast_PDB 94.7763% -91 - C4 -2KFZ 9.8 DPO1_ECOLI
6 PsiBlast_PDB 94.7763% -91 - C4 -2KFN 9.7 DPO1_ECOLI
5 PsiBlast_PDB 94.7563% -89 - C4 -1KSP 11.0 DPO1_ECOLI
3 PsiBlast_PDB 94.7163% -90 - C4 -1KFS - -
121 Fugue 94.6363% -93 - C4 -2KFZ 9.7 DPO1_ECOLI
12 PsiBlast_PDB 94.3463% -91 - C4 -1D9F 5.8 DPO1_ECOLI
8 PsiBlast_PDB 94.3263% -89 - C4 -2KZM 7.2 DPO1_ECOLI
14 PsiBlast_PDB 94.2263% -88 - C4 -1D8Y 11.1 DPO1_ECOLI
9 PsiBlast_PDB 93.9763% -89 - C4 -2KZZ 7.8 DPO1_ECOLI
10 PsiBlast_PDB 93.9463% -90 - C4 -1QSL 9.2 DPO1_ECOLI
102 HHSearch 93.3363% -88 - C4 -2KFN 9.1 DPO1_ECOLI
13 PsiBlast_PDB 92.6263% -90 - C4 -1KLN 12.0 DPO1_ECOLI
2 PsiBlast_PDB 88.8063% -87 - C4 -1KFD - DPO1_ECOLI -
101 HHSearch 87.0041% -72 - C3 -1BGX - DPO1_THEAQ -
15 PsiBlast_PDB 85.5840% -72 - C3 -1BGX - DPO1_THEAQ -
27 PsiBlast_CBE 77.9346% -89 - C4 -2HHV 8.2 ?
32 PsiBlast_CBE 77.7746% -91 - C4 -1XWL - DPO1_GEOSE -
68 PsiBlast_CBE 77.5546% -89 - C4 -2BDP 9.9 DPO1_GEOSE
52 PsiBlast_CBE 77.5246% -89 - C4 -1L3S 12.5 DPO1_GEOSE
60 PsiBlast_CBE 77.4646% -89 - C4 -1U4B 12.8 DPO1_GEOSE
25 PsiBlast_CBE 77.4646% -88 - C4 -2HW3 8.2 ?
45 PsiBlast_CBE 77.4046% -88 - C4 -1NJY 10.3 DPO1_GEOSE
67 PsiBlast_CBE 77.3646% -86 - C4 -3BDP 8.1 DPO1_GEOSE
66 PsiBlast_CBE 77.3646% -87 - C4 -4BDP 9.7 DPO1_GEOSE
94 PsiBlast_CBE 77.2546% -87 - C4 -3EYZ 11.3 DPO1_GEOSE
35 PsiBlast_CBE 77.2646% -87 - C4 -1NKC 5.0 DPO1_GEOSE
48 PsiBlast_CBE 77.2546% -89 - C4 -1L5U 9.1 DPO1_GEOSE
19 PsiBlast_PDB 77.2046% -89 - C4 -2HHT 8.0 ?
50 PsiBlast_CBE 77.1846% -88 - C4 -1L3U 9.7 DPO1_GEOSE
20 PsiBlast_PDB 77.1646% -87 - C4 -2HHU 10.5 ?
62 PsiBlast_CBE 77.0946% -89 - C4 -1U48 10.3 DPO1_GEOSE
41 PsiBlast_CBE 77.0346% -88 - C4 -1NK5 11.9 DPO1_GEOSE
51 PsiBlast_CBE 76.9846% -87 - C4 -1L3T 12.1 DPO1_GEOSE
37 PsiBlast_CBE 76.9746% -87 - C4 -1NK9 2.8 DPO1_GEOSE
56 PsiBlast_CBE 76.9646% -88 - C4 -4DSI 13.8 ?
44 PsiBlast_CBE 76.9646% -87 - C4 -1NJZ 9.1 DPO1_GEOSE
34 PsiBlast_CBE 76.8746% -87 - C4 -1NKE 6.3 DPO1_GEOSE
49 PsiBlast_CBE 76.8246% -87 - C4 -1L3V 6.0 DPO1_GEOSE
16 PsiBlast_PDB 76.7846% -89 - C4 -4O0I 5.0 ?
124 Fugue 76.7431% -77 - C4 -4XVK 8.9 DPOLN_HUMAN
58 PsiBlast_CBE 76.7346% -85 - C4 -1UA1 6.4 DPO1_GEOSE
46 PsiBlast_CBE 76.7346% -87 - C4 -1NJX 7.9 DPO1_GEOSE
61 PsiBlast_CBE 76.7246% -88 - C4 -1U49 6.0 DPO1_GEOSE
38 PsiBlast_CBE 76.7046% -85 - C4 -1NK8 6.4 DPO1_GEOSE
36 PsiBlast_CBE 76.7046% -88 - C4 -1NKB 12.5 DPO1_GEOSE
42 PsiBlast_CBE 76.6346% -85 - C4 -1NK4 4.9 DPO1_GEOSE
33 PsiBlast_CBE 76.5546% -86 - C4 -1XC9 5.7 DPO1_GEOSE
29 PsiBlast_CBE 76.5546% -91 - C4 -4DSK 10.8 ?
64 PsiBlast_CBE 76.5346% -88 - C4 -1U45 10.2 DPO1_GEOSE
26 PsiBlast_CBE 76.5146% -90 - C4 -2HHX 10.1 DPO1_BACCA
76 PsiBlast_CBE 76.4949% -88 - C4 -4B9L 11.1 ?
63 PsiBlast_CBE 76.4846% -87 - C4 -1U47 3.7 DPO1_GEOSE
55 PsiBlast_CBE 76.4346% -90 - C4 -4DWI 9.5 ?
77 PsiBlast_CBE 76.3949% -90 - C4 -2XO7 11.0 ?
47 PsiBlast_CBE 76.3846% -85 - C4 -1NJW 4.1 ?
17 PsiBlast_PDB 76.3846% -85 - C4 -2HHQ 7.9 ?
39 PsiBlast_CBE 76.3546% -87 - C4 -1NK7 7.4 DPO1_GEOSE
18 PsiBlast_PDB 76.3546% -85 - C4 -2HHS 4.3 ?
97 PsiBlast_CBE 76.2846% -89 - C4 -3HP6 14.4 ?
43 PsiBlast_CBE 76.2646% -84 - C4 -1NK0 6.8 DPO1_GEOSE
82 PsiBlast_CBE 76.2246% -88 - C4 -4F2S Error ?
40 PsiBlast_CBE 76.2246% -86 - C4 -1NK6 7.1 DPO1_GEOSE
83 PsiBlast_CBE 76.1546% -89 - C4 -4F2R Error ?
81 PsiBlast_CBE 76.0646% -91 - C4 -4F3O Error ?
91 PsiBlast_CBE 76.0346% -90 - C4 -3PX4 Error ?
69 PsiBlast_CBE 75.9749% -88 - C4 -2XY5 7.0 ?
78 PsiBlast_CBE 75.8549% -91 - C4 -2XY6 8.0 ?
59 PsiBlast_CBE 75.7546% -85 - C4 -1UA0 9.7 ?
87 PsiBlast_CBE 75.7346% -89 - C4 -4DSE Error ?
89 PsiBlast_CBE 75.7146% -87 - C4 -3THV Error ?
93 PsiBlast_CBE 75.6946% -87 - C4 -3PV8 Error ?
86 PsiBlast_CBE 75.6646% -88 - C4 -4DSF Error ?
90 PsiBlast_CBE 75.6746% -86 - C4 -3PX6 Error ?
85 PsiBlast_CBE 75.6646% -88 - C4 -4EZ6 Error ?
31 PsiBlast_CBE 75.6446% -86 - C4 -4DSJ 10.0 ?
84 PsiBlast_CBE 75.6046% -88 - C4 -4EZ9 Error ?
71 PsiBlast_CBE 75.6049% -87 - C4 -4B9U 8.2 ?
92 PsiBlast_CBE 75.5346% -88 - C4 -3PX0 Error ?
72 PsiBlast_CBE 75.5249% -88 - C4 -4B9T 6.5 ?
80 PsiBlast_CBE 75.5246% -89 - C4 -4F4K Error ?
65 PsiBlast_CBE 75.5349% -87 - C4 -4UQG 9.4 ?
28 PsiBlast_CBE 75.5246% -87 - C4 -4DSL 8.1 ?
88 PsiBlast_CBE 75.4746% -86 - C4 -3TI0 Error ?
75 PsiBlast_CBE 75.4049% -85 - C4 -4B9M 6.4 ?
98 PsiBlast_CBE 75.3946% -89 - C4 -3HP6 13.8 ?
70 PsiBlast_CBE 75.2149% -86 - C4 -4B9V 8.0 ?
96 PsiBlast_CBE 75.1646% -87 - C4 -2HHW 12.4 ?
74 PsiBlast_CBE 75.1449% -84 - C4 -4B9N 6.3 ?
73 PsiBlast_CBE 75.1449% -85 - C4 -4B9S 8.1 ?
53 PsiBlast_CBE 74.9946% -87 - C4 -1LV5 8.9 DPO1_GEOSE
95 PsiBlast_CBE 74.9646% -85 - C4 -2HHW 12.1 ?
57 PsiBlast_CBE 74.9449% -88 - C4 -2XY7 8.6 ?
54 PsiBlast_CBE 74.8546% -85 - C4 -1LV5 Error DPO1_GEOSE
125 Fugue 73.9633% -75 - C4 -4X0Q 4.2 DPOLQ_HUMAN
30 PsiBlast_CBE 73.8646% -86 - C4 -4DSJ 7.3 ?
79 PsiBlast_CBE 73.3546% -92 - C4 -4F8R Error ?