@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5503: (2016-03-08 )
MIEFHDVHKTYRVAGREIPALQPTRLNIQAGQIFGLIGHSGAGKSTLLRLINRLEEPSGGRILVEGEDVTALDAEGLRRFRQRVGMIFQHFNLLSSKTVADNIAMPLRLAGGFSRAEVDARVSELLARVGLSDHARKYPAQLSGGQKQRVGIARALACRPSILLCDEATSALDPQTTASVLQLLAEINRELKLTIVLITHEMDVIRRVCDQVAVMDGGAIVEQGDVADVFLHPQHPTTRRFVFEAERVDEDERHDDFAHVPGLILRLTFRGEATYAPLLGTVARQTGVDYSILSGRIDRIKDTPYGQLTLALVGGDLEAAMSQLNAADVHVEVLR

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




2 PsiBlast_PDB 94.7247%-123 - C1 -3TUI - METN_ECOLI -
3 PsiBlast_PDB 94.3247%-130 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 94.1747%-132 - C1 -3TUI - METN_ECOLI -
26 PsiBlast_CBE 93.8947%-126 - C1 -3TUI - METN_ECOLI -
112 HHSearch 93.1948%-125 - C1 -3TUI - METN_ECOLI -
25 PsiBlast_CBE 93.1847%-125 - C1 -3TUI - METN_ECOLI -
23 PsiBlast_CBE 92.7347%-126 - C1 -3TUZ - METN_ECOLI -
21 PsiBlast_CBE 91.8547%-127 - C1 -3TUZ - METN_ECOLI -
22 PsiBlast_CBE 91.8047%-120 - C1 -3TUZ - METN_ECOLI -
133 Fugue 90.9647%-127 - C1 -3TUZ - METN_ECOLI -
1 PsiBlast_PDB 90.9647%-117 - C1 -3DHW - METN_ECOLI -
129 HHSearch 69.3743%-122 - C1 -1B0U 5.7 HISP_SALTY
41 PsiBlast_CBE 67.1540%-121 - C1 -4YMU - ? -
18 PsiBlast_PDB 66.6342%-119 - C1 -1B0U - HISP_SALTY -
13 PsiBlast_PDB 66.3540%-122 - C1 -4YMS - ? -
16 PsiBlast_PDB 66.2940%-122 - C1 -4YMV - ? -
15 PsiBlast_PDB 66.2840%-121 - C1 -4YMU - ? -
12 PsiBlast_PDB 65.8843%-118 - C1 -4U02 - ? -
14 PsiBlast_PDB 65.7440%-123 - C1 -4YMT - ? -
40 PsiBlast_CBE 65.6040%-120 - C1 -4YMV - ? -
128 HHSearch 64.5143%-123 - C1 -2OLJ 6.1 ?
131 HHSearch 58.2936%-119 - C1 -3TIF 6.3 Y796_METJA
119 HHSearch 53.1930%-112 - C1 -3FVQ 7.2 FBPC_NEIG1
99 PsiBlast_CBE 50.2835%-107 - C1 -4AYW 5.4 ABCBA_HUMAN
97 PsiBlast_CBE 50.1335%-104 - C1 -4AYT 5.8 ABCBA_HUMAN
96 PsiBlast_CBE 49.6535%-110 - C1 -4AYX 5.8 ABCBA_HUMAN
86 PsiBlast_CBE 43.4832%-103 - C1 -2FGJ 5.6
77 PsiBlast_CBE 43.4334%-112 - C1 -2PMK 5.2
89 PsiBlast_CBE 43.2832%-100 - C1 -2FGJ 5.5 HLYBP_ECOLX
92 PsiBlast_CBE 42.9632%-108 - C1 -1XEF 5.2 HLYBP_ECOLX
85 PsiBlast_CBE 42.9632%-101 - C1 -2FFB 5.1
78 PsiBlast_CBE 42.6433%-105 - C1 -2FF7 5.0
91 PsiBlast_CBE 42.6132%-108 - C1 -1XEF 5.6
94 PsiBlast_CBE 42.4532%-103 - C1 -1XEF 4.6 HLYBP_ECOLX
90 PsiBlast_CBE 42.3432%-102 - C1 -2FFA 5.0
84 PsiBlast_CBE 41.9632%-106 - C1 -2FGK 6.0 HLYBP_ECOLX
81 PsiBlast_CBE 41.8932%-102 - C1 -2FGK 5.9
88 PsiBlast_CBE 41.7632%-108 - C1 -2FGJ 6.0 HLYBP_ECOLX
87 PsiBlast_CBE 41.5832%-102 - C1 -2FGJ 5.5 HLYBP_ECOLX
80 PsiBlast_CBE 41.4034%-109 - C1 -3B5J 5.2
93 PsiBlast_CBE 41.3032%-107 - C1 -1XEF 6.0 HLYBP_ECOLX
83 PsiBlast_CBE 40.8632%-104 - C1 -2FGK 6.1 HLYBP_ECOLX
82 PsiBlast_CBE 40.5832%-105 - C1 -2FGK 5.5 HLYBP_ECOLX