@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5546: (2016-03-08 )
MIAQLPSELLSLQLPLRIRIGDAQAFDLGPDPQVTMVIRDPSLLTEITHPSLDALGKAYVEKRLDIEGPISQVIGIGDALSEALGEPDGGAPPVRESHDKDTDAEAIHYHYDLSNDFYQLWLDPEMVYSCAYFETGKEDLATAQLAKLRHLCRKLRLQPGEKLLDVGCGWGGLARLAAREFGVEVTGITLSKEQLALGRERVKAEGLEDRVTLKLLDYRDLPRDGRFDKVVSVGMFEHVGHANLGLYFQQLYEAVRPGGLVMNHGITSRYTDGRPVGKGAGDFIDRYVFPHGELPHLSLAVARMSEAGLEVVDVESLRLHYARTLDFWSANLEARLKEAARLVPEETLRIWRLYLAGCAYGFKRGWINLHQILAIRPHEDGSHELPWSRRDLYA

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_A_9(1KPG)
CMAS1_MYCTU
[Raw transfer]




SAH_K_11(1KPH)
CMAS1_MYCTU
[Raw transfer]




SAM_B_2(2FK8)
MMAA4_MYCTU
[Raw transfer]




SAH_J_10(1KPH)
CMAS1_MYCTU
[Raw transfer]




SAH_I_9(1KPH)
CMAS1_MYCTU
[Raw transfer]




SAH_A_9(1KPG)
CMAS1_MYCTU
[Raw transfer]




SAH_I_9(1KPH)
CMAS1_MYCTU
[Raw transfer]




SAH_L_12(1KPH)
CMAS1_MYCTU
[Raw transfer]




SAH_G_7(1KPI)
CMAS2_MYCTU
[Raw transfer]




SAM_B_2(2FK8)
MMAA4_MYCTU
[Raw transfer]




SAH_F_6(1L1E)
CMAS3_MYCTU
[Raw transfer]




SAH_A_2(3HA3)
MMAA4_MYCTU
[Raw transfer]




SAH_I_9(1KPH)
CMAS1_MYCTU
[Raw transfer]




SAH_C_3(1TPY)
MMAA2_MYCTU
[Raw transfer]




B32_A_2(3HA7)
MMAA4_MYCTU
[Raw transfer]




SAH_E_5(1L1E)
CMAS3_MYCTU
[Raw transfer]




16A_A_13(1KPG)
CMAS1_MYCTU
[Raw transfer]




16A_D_4(1TPY)
MMAA2_MYCTU
[Raw transfer]




D22_A_2(3HEM)
CMAS2_MYCTU
[Raw transfer]




10A_P_16(1KPH)
CMAS1_MYCTU
[Raw transfer]




D22_A_2(3HEM)
CMAS2_MYCTU
[Raw transfer]




10A_H_8(1KPI)
CMAS2_MYCTU
[Raw transfer]




SFG_A_2(3HA5)
MMAA4_MYCTU
[Raw transfer]




ACY_D_4(1KP9)
CMAS1_MYCTU
[Raw transfer]




ACY_C_3(1KP9)
CMAS1_MYCTU
[Raw transfer]




6 PsiBlast_PDB 90.2033% -99 - C2 -1KPI 7.6 CMAS2_MYCTU
116 HHSearch 88.2134% -92 - C2 -3HEM 6.0 CMAS2_MYCTU
7 PsiBlast_PDB 88.0433% -93 - C2 -3HEM 6.0 CMAS2_MYCTU
22 PsiBlast_CBE 87.5139% -97 - C2 -1KPH 6.4 CMAS1_MYCTU
21 PsiBlast_CBE 87.2739% -96 - C2 -1KPH 7.7 CMAS1_MYCTU
2 PsiBlast_PDB 87.0739% -96 - C2 -1KPH 6.3 CMAS1_MYCTU
3 PsiBlast_PDB 86.6239% -96 - C2 -1KPG 6.8 CMAS1_MYCTU
23 PsiBlast_CBE 86.1039% -97 - C2 -1KPH 5.9 CMAS1_MYCTU
117 HHSearch 85.0937% -88 - C2 -1KPG 6.2 CMAS1_MYCTU
1 PsiBlast_PDB 85.0839% -98 - C2 -1KP9 2.6 CMAS1_MYCTU
24 PsiBlast_CBE 84.9939% -98 - C2 -1KP9 4.0 CMAS1_MYCTU
107 Fugue 84.8837% -90 - C2 -1KPH 7.2 CMAS1_MYCTU
105 Fugue 84.8837% -90 - C2 -1KPH 7.2 CMAS1_MYCTU
4 PsiBlast_PDB 84.7335% -91 - C2 -1TPY 7.4 MMAA2_MYCTU
9 PsiBlast_PDB 84.0132% -93 - C2 -2FK8 7.6 MMAA4_MYCTU
8 PsiBlast_PDB 83.9032% -94 - C2 -2FK7 - MMAA4_MYCTU -
115 HHSearch 83.7133% -88 - C2 -2FK8 7.6 MMAA4_MYCTU
11 PsiBlast_PDB 83.6732% -95 - C2 -3HA5 6.9 MMAA4_MYCTU
10 PsiBlast_PDB 83.2932% -94 - C2 -3HA3 4.9 MMAA4_MYCTU
5 PsiBlast_PDB 82.0934% -96 - C2 -1L1E 5.5 CMAS3_MYCTU
25 PsiBlast_CBE 81.1334% -95 - C2 -1L1E 5.8 CMAS3_MYCTU
12 PsiBlast_PDB 80.6532% -96 - C2 -3HA7 8.5 MMAA4_MYCTU