Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEAASCARKGTKYAEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPKKWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQRRPQSCKVLVLDADLNLENIGTEYQRSESSIFDAISSNQQPSPVLVSPSKRQRVAR
1J90 Chain:A ((18-212))
-----------------TQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPKKWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQRRPQSCKVLVLDADLNLE--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1J90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98834 for 1500 contacts (-65.9/contact) +
2D Compatibility (PS) -21590 + (NN) -12499 + (LL) 3220
1D Compatibility (HY) -30000 + (ID) 9750
Total energy: -169453.0 ( -112.97 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_1J90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J90-query.scw
PDB file :
Tito_Scwrl_1J90.pdb
: