Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEHTHAHLAANSSLSWWSPGSACGLGFVPVVYYSLLLCLG-LPANILTVIILSQLVARRQKSSYN-YLLALAAADILVLFFIVF--VDFLLEDFILNMQMPQVPDKIIEVLEFSSIHTSIWITVPLTIDRYIAVCHPLKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWPNIWTEDYISTSVHHVLI----WIHCFTV------YLVPCSIFFILNSIIVYKLRRK---SNFRLRGYSTGKTTAILFTITSIFATLWAPRIIMILYHLYGAPIQNRWLVHIMSDIANMLALLNTAINFFLYCFISKRFRTMAAATLKAFFKCQKQPVQFYTNHNFSITSSPWISPANSHCIKMLVYQYDKNGKPIKVSP |
| 4EA3 Chain:A ((126-402)) | ---------------------------VTIVGLYLAVCVGGLLGNCLVMYVI--LRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGFWPFGNALC----KTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILR-FCTALGYVNSCLNPILYAFLDENFKACFR-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238067 for 1846 contacts (-129.0/contact) +
2D Compatibility (PS) -25351 + (NN) 209 + (LL) 5592
1D Compatibility (HY) -22000 + (ID) 3100
Total energy: -282717.0 ( -153.15 by residue)
QMean score : 0.193
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