Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDELAPCPVGTTAWPALIQLISKTPCMPQAASNTSLGLGDLRVPSSMLYWLFLPSSLLAAATLAV---SPLLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHMLISS--SSLGGWELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWL--VACCFPTFLIWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCFWRIYAEAKTSGIWGQGYSRARGTLLIHSVLITLYVSTGVVFSLDMVLTRYHHIDSGTHTWLLAANSEVLMMLPRAMLTYLYLLRYRQLLGMVRGHLPSRRHQAIFTIS |
| 4IAQ Chain:A ((19-208)) | --------------------------------------------------WKVLLVMLLALITLATTLSNAFVIATVYRTRKLHTPANYLI-ASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVCDFWLSSDITCCTASIWHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPPFF-----WRQA------SECVVNTDH---------ILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIADLEDNWETLNDNLKVINAAQVKDALTKMRAAALDAQKATPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLLMA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IAQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156565 for 1137 contacts (-137.7/contact) +
2D Compatibility (PS) -18152 + (NN) -7138 + (LL) 3352
1D Compatibility (HY) -19200 + (ID) 2500
Total energy: -200203.0 ( -176.08 by residue)
QMean score : 0.306
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