Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQPSPPPTELVPSERAVVLLSCALSALGSGLLVATHALWPDLRSRARRLLLFLSLADLLSAASY-FYGV--LQNFAGPSWDCVLQGALSTFANTSSFFWTVA-IALYLYLSIVRAARGPRTDRLLWAFHVVSWGVPLVITVAAVALKKIGYDASDVSVGWCWIDLEAKDHVLWMLLTGKLWEMLAYVLLPLLYLLVRKHINRAHTALSEYRPILSQEHRLLRHSSMADKKLVLIPLIFIGLRVWSTVRFVLTLCGSPAVQTPVLVVLHGIGNTFQGGANCIMFVLCTRAVRTRLFSLCCCCCSSQPPTKSPAGTPKAPAPSKPGESQESQGTPGELPST |
4RWS Chain:A ((49-169)) | ---------FLPTIYSIIFLT---GIVGNGLVILVMGYQ----SMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIYT-VNLYSSVWILAFISLDRYLAIVHATNSQRPRKLL-AEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICCRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49266 for 667 contacts (-73.9/contact) +
2D Compatibility (PS) -11851 + (NN) -4834 + (LL) 620
1D Compatibility (HY) -12800 + (ID) 1850
Total energy: -79981.0 ( -119.91 by residue)
QMean score : 0.114
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