Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWNSSDANFSCYHESVLGYRYVAVSWGVVVAVTGTVGNVLTLLALAIQPKLRTRFNLLIANLTLADLLYCTLLQPFSVDTYL-HLHWRTGATFCRVFGLLLFASNSVSILTLCLIALGRYLLIAHPKLFPQVFSAKGIVLALVSTWV--VGVASFAPLWPIYILV-PVVCTCSFDRIRGRPYTTILMGIYFVLGLSSVGIFYCL-IHRQVKRAAQALDQYKLRQASI----HSNHVARTDEAMPG-RFQELDSRLASGGPSEGISSEPVSAATTQTLEGDSSEVGDQINSKRAKQMAEKSPPEASAKAQPIKGARRA-----PDSSSEFGKVTRMCFAVFLCFALSYIPFLLLNIL----DARVQAPRVVHMLAANLTWL---NGCINPVLYAAMNRQFRQAYGSILKRGPRSFHRLH |
| 4IB4 Chain:A ((39-408)) | ---------------------------VIIPTIG--GNTLVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEAMWPLPLVLCPAWLFLDVLFSTASIWHLCAISVDRYIAIKKPIQANQYNSRATAFIKITVVWLISIGIAIPVPIKGIET--NPNNITCVLTKERFGDFMLFGSLAAFFTPLAIMIVTYFLTIHALQKKAADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQK------------------KDFRHGFDILVG-QIDDA-LKLANEGKVKEAQAAAEQLKTTRNAYIQKYLQTISNEQRASKVLGIVFFLFLLMWCPFFITNITLVLCDSCNQT--TLQMLLEIFVWIGYVSSGVNPLVYTLFNKTFRDAFGRYITCNYR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182993 for 2302 contacts (-79.5/contact) +
2D Compatibility (PS) -34232 + (NN) -11552 + (LL) 2644
1D Compatibility (HY) -21200 + (ID) 4550
Total energy: -251883.0 ( -109.42 by residue)
QMean score : 0.257
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