Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASPSNDSTAPVSEFLLICFPNFQSWQHWLSLPLSLLFLLAMGANTTLLITIQLEASLHQPLYYLLSLLSLLDIVLCLTVIP----KVLAIFWFDLRSISFPACFLQMFIMNSFLTMESC--TFMVMAYDRYVAICHPLRYPSIITDQFVARAVVFVIARNAFVS-LPVPMLSARLRYCAGNIIKNCICSNLSVSKLSCDDITFNQLYQFVAGWTLLGSDLILIVISYSFILKVVLR---------IKAEGAVAKALSTCG---SHFILIL--FFSTVLLVLVITNLARKRIPPDVPILLNILHHLIPPALNPIVYGVRTKEIKQGIQNLLKRL |
4GBR Chain:A ((2-284)) | -----------------------EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTW------TFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEA---INC------YAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKFCLKEH----KALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRK----EVYILLNWIGY-VNSGFNPLIY-CRSPDFRIAFQELLCL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224543 for 1889 contacts (-118.9/contact) +
2D Compatibility (PS) -26410 + (NN) -7531 + (LL) 2620
1D Compatibility (HY) -27600 + (ID) 3700
Total energy: -287164.0 ( -152.02 by residue)
QMean score : 0.222
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