Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVVLQELRDSNSSKFQVSEFILMGFPGIHSWQHWLSLPLALLYLLALSANILILIIINKEAALHQPMYYFLGILAMADIGLATTIMPKILAILWFNAKTISLLECFAQMYAIHCFVAM--ESSTF--VCMAIDRYVAICRPLRYPSIITESFVFKANGFMALRNSLCLISVPLLAAQRHYCSQNQIEHCLCSNLGVTSLSCDDRRINSINQVLLAWTLMGSDLGLIILSYALILYSVLKLNSPEAASKALSTCTSHLILILFFYTVIIVISITRSTGMRVPLIPVLLNVLHNVIPPALNPMVYALKNKELRQGLYKVLRLGVKGT |
3EML Chain:A ((18-142)) | ----------------------------IMGSSVYITVELAIA-VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITI-----STGFCAACHGCLF-IACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGT---RAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85616 for 711 contacts (-120.4/contact) +
2D Compatibility (PS) -12613 + (NN) -6342 + (LL) 3376
1D Compatibility (HY) -13600 + (ID) 2050
Total energy: -116845.0 ( -164.34 by residue)
QMean score : 0.158
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