Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRGNSTEVTEFHLLGFGVQHEFQHVLFIVLLLIYVTSLIGNIGMILLIKTDSRLQTPMYFFPQHLAFVDICYTSAITP--KMLQSFTEENNLITFRGCVIQFLVYATFATSDCYLLAIMAMDCYVAICKPLRYPMIMSQTVYIQLVAGSYIIGSINASVHTGFTFSLSFCKSNKINHFFCDGLPILALSCSNIDINIILDVVFVGFDLMFTELVIIFSYIYIMVTILKMSSTAGRKKSFSTCASHLTAVTIFYGTLSYMYLQPQSNNSQENMKVASIFYGTVIPMLNPLIYSLRNKEGK |
2R4S Chain:A ((38-147)) | ----------------------------IVMSLIVLAIVFGNVLVITAIA-FERLQTVTNYFITSLACADLVMGLAVVPFG--------------FWTSIDVLCVTASIET-----LCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVFCLKEHKALKTLGIIMGTFTLCWLPFFILNWIGYVNSGFNPLIYCRSPDFRIAFQELLCLRRSSLK------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2R4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -73884 for 540 contacts (-136.8/contact) +
2D Compatibility (PS) -8826 + (NN) 1382 + (LL) 5804
1D Compatibility (HY) -10800 + (ID) 1500
Total energy: -87824.0 ( -162.64 by residue)
QMean score : 0.160
|
|
|