Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNQSSPMGFLLLGFSEHPALERTLFVVVFTSYLLTLVG---NTLIILLSVLYPRLHSPMYFFLSDLSFLDL-----CFTTSCVPQML-VNLWGPKKTISFLGCSVQLFIFLSLGTTECILLTVMAFDRYVAVCQPLHYATIIHPRLCWQLASVAWVMSLVQSIVQTPSTLHLPFCPHQQIDDFLCEVPSLIRLSCGDTSY-------NEIQLAVSSVIFVVVPLSLILASYGATAQAVLRINSATAWRKAFGTCSSHLTVVTLFYSSVIAVYLQPKNPYA-------QGRGKFFG-------LFYAVGTPSLNPLVYTLRNKEIKRAL-------RRLLGKERDSRESWRAA |
| 2X72 Chain:A ((48-327)) | --------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPT------GCNLQGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVA-FTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYG---QLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141235 for 1734 contacts (-81.5/contact) +
2D Compatibility (PS) -24113 + (NN) -2720 + (LL) 4988
1D Compatibility (HY) -400 + (ID) 650
Total energy: -164130.0 ( -94.65 by residue)
QMean score : 0.142
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