Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTEFIFLGLSDSQELQTFLFMLFFVFYGGIVFGNLLIVITVVSDSHLHSPMYFLLANLSLIDLSLSSVTAPKMITDFFSQRKVISFKGCLVQIFLLHFFGGSEMVILIAMGFDRYIAICKPLHYTTIMCGNACVGIMAVAWGIGFLHSVSQLAFAVHL-PFCGPNEVDSFYCDLPRVIK--------LAC--TDTYRLDIMVIANSGVLTVCSFVLLIISYTIIL---------MTIQHCPLDKSSK-------------------ALSTLTAHITVVLLFFGP-CVFIYAWPFPIKSLDKFLAVFYSVITPLLNPIIYTLRNKDMKTAIRRLRKWDAHSSVKF |
| 3VG9 Chain:A ((21-302)) | -------------------------------ILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICW---------VLSFAIGLTPMLGWNN-----CGQ-----SQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLM-------YLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212634 for 1682 contacts (-126.4/contact) +
2D Compatibility (PS) -23862 + (NN) -3041 + (LL) 4652
1D Compatibility (HY) -28800 + (ID) 3550
Total energy: -267235.0 ( -158.88 by residue)
QMean score : 0.198
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