Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSPFYRCQNTTSVEKGNSAVMGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPSVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSL--AFCALPFMGFGKFVQYC------PGTWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSCTRDCAEPRADGREASPQPLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKEKNRTSEEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFFHKIFIRPLRYRSRCSNSTNMESSL |
| 4BV0 Chain:A ((91-262)) | --------------------------------------------------------------------------------------------------AFGDAGCKGYYFLREACTYATALNVVSLSVELYLAIRHP--------LMSRSRTKKFISAIWLASALLAIPML-FTVGLQNLSGDGTHPGGLVCTPIVDTATLKVVIQLNTFMSFLFPMLV-ASILNTVIARRLTVMVH----------------P---GR---VQALRR--GVLVLRAMVIAFVVCWLPYHVRRLMFVYISDEQWTTALFDFYHYFYMLSNALVYVSAAINPILYNLVSANFRQVFLSTLACL--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105909 for 936 contacts (-113.2/contact) +
2D Compatibility (PS) -15663 + (NN) -11223 + (LL) 9944
1D Compatibility (HY) -17600 + (ID) 2100
Total energy: -142551.0 ( -152.30 by residue)
QMean score : 0.141
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