Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESALPSIFTLVIIAEFIIGNLSNGFIVLINCIDWVSKRELSSVDKLLIILAISRIGLIWEILVSWFLALHYLAIFVSGTGLRIMIFSWIVSNHFNLWLATIFSIFYLLKIASFSSPAFLYLKWRVNKVILMILLGTLVFLFLNLIQINMHIKDWLDRYERNTTWNFSMSDFETFSVSVKFTMTM-----FSLTPFTVAFISFLLLIFSLQKHLQKMQLNYKGHRDPRTKVHTNALKIVISFLLFYASFFLCV---LISWISELYQNTVIYMLCETIGVFSPSSHSFLLILGNAKLRQAFLLVAAKVWAKR |
4KWC Chain:A ((104-239)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------NIKANFICTDIKNFSSHAKIYDVILIHLCFGLFENPIELLEQLLPYLSNESMIYIVDLNRDSIESGLSSVQSKEEELYI-YDQYHASLTLSEFEQLLTYITKPREDMMYKIGTSIIGGFSPFSMEFLSLIGNGNLQQTLRQAPDVLLHAW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KWC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79919 for 701 contacts (-114.0/contact) +
2D Compatibility (PS) -13087 + (NN) 1257 + (LL) 16628
1D Compatibility (HY) -6800 + (ID) 1650
Total energy: -83571.0 ( -119.22 by residue)
QMean score : 0.170
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