Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSAGLGLLMLVAVVEFLIGLIGNGSLVVWSFREWIRKFNWSSYNLIILGLAGCRFLLQWLIILDLSLFPLFQSSRWLRYLSIFWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIINLLLTVQIGLTFYHPPQGNSSIRYPFESWQYLYAFQLNSGSYLPLVVFLVSSGMLIVSLYTHHKKMKVHSAGRRDVRAKAHITALKSLGCFLLLHLVYIMASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLILIMGIPRVKQTCQKILWKTVCARRCWGP
1T3T Chain:A ((1206-1244))
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HGEGRVEVRDDAHLAALESKG---LVALRYV--DNFGKVTETYPANPNGSPNGITAVTTENGRVTIMMPHPERVFRTVANSWHPENWGEDSPWMR
General information:
TITO was launched using:
RESULT:
Template:
1T3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5170 for 157 contacts (-32.9/contact) +
2D Compatibility (PS) -4241 + (NN) -2000 + (LL) 18988
1D Compatibility (HY) 2000 + (ID) 250
Total energy: 9327.0 ( 59.41 by residue)
QMean score : 0.135
(partial model without unconserved sides chains):
PDB file :
Tito_1T3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T3T-query.scw
PDB file :
Tito_Scwrl_1T3T.pdb
: