Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKVQTTLLFLAVGEFSVGILGNAFIGLVNCMDWVKKRKIASIDLILTSLAISRICLLCVILLDCFILVLYPDVYATGKEMRIIDFFWTLTNHLSIWFATCLSIYYFFKIGNFFHPLFLWMKWRIDRVISWILLGCVVLSVFISLPATENLNADFRFCVKAKRKTNLTWSCRVNKTQHASTKLFLNLATLLPFCVCLMSFFLLILSLRRHIRRMQLSATGCRDPSTEAHVRALKAVISFLLLFIAYYLSFLIATSSYFMPETE-LAVIFGESIA-----LIYPSSHSFILILGNNKLRHASLKVIWKVMSILKGRKFQQHKQI |
| 1V4I Chain:A ((44-139)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVRLSILSFKNRGVEIGEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVEEIGNNKLRRAALNVIGKMSEAELIEQLSRYKPI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53124 for 528 contacts (-100.6/contact) +
2D Compatibility (PS) -9466 + (NN) -2775 + (LL) 20232
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -51583.0 ( -97.70 by residue)
QMean score : 0.162
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