Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASRYVAVGMILSQTVVGVLGSFSVLLHYLSFYCTGCRLRSTDLIVKHLIVANFLALRCKGVPQTMAAFGVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSVFQVITVSSRKSRWAKLKEKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNNKIAQTLRAMLLSFPDVLCLGLMLWVSSSMVCILHRHKQRVQHIDRSDLSPRASPENRATQSILILVSTFVSSYTLSCLFQVCMALLDNPNSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWKR |
3IJH Chain:B ((154-226)) | -------------------------------------------------------------------------------------------------------------------------------------------LVKGYFPEPVTVKWNYGALS----------SGVRTVSSVLQSGFYSLSSLVTVPSSTWPSQTVICNVAHPASKTELIKR--IEPR----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34346 for 428 contacts (-80.2/contact) +
2D Compatibility (PS) -7612 + (NN) 1468 + (LL) 18128
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -28162.0 ( -65.80 by residue)
QMean score : -0.043
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