Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIIKFVLLLPTILLILTAGVYLSVRLKWLQIFRLPHALSLIGVKKGENKFSSIAALFTILGGNLGVGNISGTAVALKTGGPGSILWMAIIVIITSVIKYVTCYLSIKNRKKKNGRFIGGPMAYMVDAFNSRKATVVFLVIMIMVSIIVGNLVQVNSLSIPLDMIN--VPV-V---TGGIIMTIIFFVVAALSLKKIKIFISAMIPIMTISYLTLCGIIL-FKFSENILPSLK-----LITSSFFTTSSFNFGLSLGLVLEMLTIIQVGTLRGIFATDIGLGLEGIVHSSIIPKKNNNKFIIEQSLI-TIISPFIV-AFIVFITTMVLLVTDSWV-TGLESTNMCIFAFRKAMNWPYIDYLIMAIMFCFAFTTIFTWFFCSKQTIRYVSQNDKYTKIWIIIFTAVIPLGSISKVQLLWDVADISIAALLFINILAILKLTSRDPEVFTVSSRYLKLNQPIFNKNKTRNWLAILILRG |
| 3GIA Chain:A ((3-304)) | ---------------------------------------------LKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSN------AGPIAFIHKAIGDNIITGALSILLWM-SYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSY---MGFGV------------------------ITNAS--EH-----IENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENA-LAVAAKPFLGN-LGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280185 for 2442 contacts (-114.7/contact) +
2D Compatibility (PS) -29209 + (NN) -3305 + (LL) 7520
1D Compatibility (HY) -800 + (ID) 1750
Total energy: -307729.0 ( -126.02 by residue)
QMean score : 0.275
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