Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIKLFFIFTLLFFDASTYCSCEDIIESIEICKEYTCQQYIGNEDFIEHKILGLSSKDLCVYIEKQDNDEMVCHHSKYGMMMEKKYLESIFKVGNQEINDFIDIANLRAKECFFISNQKTSYTNRDYIIKE------AVESNFDVLSQYND-----IKS-----IFFDKESVNKMVSEMKKFNLRSSRAAKEEILDNFNSKVVSLD------SILYLSPDTWKIWVNRKLFTNTKNLKVYSVTENYVTFVWTVNQKMTKKQPNDSKNVYFGYGNIMFTLYPKQKFDLDSLSIK |
| 3KVE Chain:A ((165-279)) | -------------------------------------------------------------------------------------------------------VKDLKRTNCSYILNKYDTYSTKEYLIKEGNLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFAYEKRFDEIVGGMDQLPTSMYRAIEEKV--KFNARVIKIQQNANQVTVTYQTPEKDTSSNTADYVIVCTTSRAARRIQFEPPLPPKKQHALRSVHYRSGTKIFLTCSSKFWEDDGIHGGKSTTDLPS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3506 for 415 contacts (8.4/contact) +
2D Compatibility (PS) -9078 + (NN) 1368 + (LL) 8428
1D Compatibility (HY) -8000 + (ID) 1350
Total energy: -5126.0 ( -12.35 by residue)
QMean score : 0.146
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