Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPEVTKLDNGLRIITEQMRDIDSVALNIRVGVGSRAESANQNGISHFLEHMAFKGTKTRTAFEIAKTFDDIGGVFNASTGRERTSYYAKVLKKDVKIGIDILIDILMNSTFPKDELEREKGVVIQEIFQINDSPSDIIFDKYFEAAYKDQPFGRSILGTQDTVKSFAQGDLNNYINEHYFGENIIFAVAGNVEHEEIAQLTKDFLSKVSSQKLK-ESQNANCTGGEYLEHRKLDQVHLLIGFPSVSCHDDRYHTFQVLDSILGSGMSSRLFQEVREKQGLAYSVYSFNSSYTDTGMLSIFAGTDSSNLDKLLKSITTELKKLSTNDLREEEVNRVKERIKSQILMSRESVSSCAEALEHYYGNYNRYISKDELIEKTSAVTTADVKRAVEELLSKHEKTTLA-AIGEIKSLPGYDKVVSMLRA |
| 3HDI Chain:A ((2-407)) | -INTMTLDNGVRIITEKMSTVRSVSIGIWVGTGSRYESAEENGISHFLEHMFFKGTNTRSAQEIAEFFDSIGGQVNAFTSKEYTCYYAKVLDDHAGQAIDTLSDMFFHSTFQKEELEKERKVVFEEIKMVDDTPDDIVHDLLSSATYGKHSLGYPILGTVETLNSFNEGMLRHYMDRFYTGDYVVISVAGNV-HDELIDKIKETFSQVKPTTYNYQGEKPMFLPNRIVRKKETEQAHLCLGYPGLPIGDKDVYALVLLNNVLGGSMSSRLFQDIREKRGLCYSVFSYHSSFRDSGMLTIYAGTGHDQLDDLVYSIQETTSALAEKGLTEKELENGKEQLKGSLMLSLESTNSRMSRNGKNELLLKKHRSLDEMIEQINAVQKQDVSRLAKILLSASPSISLINANGELPKALIHLE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135286 for 3393 contacts (-39.9/contact) +
2D Compatibility (PS) -43770 + (NN) -16429 + (LL) 228
1D Compatibility (HY) -31600 + (ID) 8550
Total energy: -235407.0 ( -69.38 by residue)
QMean score : 0.500
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