Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVITIASAVAEVERMSIL--LSQVKHETLLTMQVLNEHKSLSRSLVEKLNKKEDDNLSTKDISIYMTHLLLEHYNVKMHCICENNLLEIGLTLT
1GDT Chain:A ((106-151))
MVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN----------------
General information:
TITO was launched using:
RESULT:
Template:
1GDT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1101 for 157 contacts (-7.0/contact) +
2D Compatibility (PS) -4514 + (NN) -686 + (LL) 656
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -8445.0 ( -53.79 by residue)
QMean score : 0.098
(partial model without unconserved sides chains):
PDB file :
Tito_1GDT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GDT-query.scw
PDB file :
Tito_Scwrl_1GDT.pdb
: