Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNLLKKFNEQQMQVLAKEVPEFRPGDDLKVTFKVVDSTSERIQIFEGVCISKRNRGLHSSFAVRKVSHGESIVSQFFIYSPALVSVQVTRRGKVRRAKLYYLCKLFGKAARIKERATYKNNKSN
3J7Z Chain:P ((2-113))
-SNIIKQLEQEQMK---QDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN-------
General information:
TITO was launched using:
RESULT:
Template:
3J7Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53140 for 712 contacts (-74.6/contact) +
2D Compatibility (PS) -11679 + (NN) -2729 + (LL) 976
1D Compatibility (HY) -8800 + (ID) 3000
Total energy: -78372.0 ( -110.07 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_3J7Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7Z-query.scw
PDB file :
Tito_Scwrl_3J7Z.pdb
: