Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEWLISD-QLINYNYAVKFMEKKIQQIHNNSSDELVWLLQHPPLYTAGISATDDDVV-------EKLLPIYKTGRGGKYTYHGPGQRIIYLMLNLKKRNKCDIKLYIRELGSWIINVLKHFNIFGEFKEDRIGVWVNNNGVEEKIAAFGIRLRKWITYHGIALNFSPDLSHYKGIIPCGLKGYGVTSIKE-LGVKAPLFKLDNILKKEFYKIF
2QHS Chain:A ((21-225))
-MEFLVEDLGLVPYGEAWAYQKRVHREVVAGNRPPTLLLLEHPRVITLGRKATGENLLFPESWYRENGFELYWVERGGDVTYHGPGQLVGYPIFPVGR----EVRRFLRQIEEAIVRVAAGYGISAYPTPGYAGVWVG----EDKLCAIGVAVKEGVSFHGFALNVNTDLNDFTVIVPCGLKGKGVTSLEKLLGRKVPMEEAKARVVAAFAEVF
General information:
TITO was launched using:
RESULT:
Template:
2QHS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123866 for 1578 contacts (-78.5/contact) +
2D Compatibility (PS) -20875 + (NN) -7914 + (LL) 208
1D Compatibility (HY) -16800 + (ID) 3150
Total energy: -172397.0 ( -109.25 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_2QHS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QHS-query.scw
PDB file :
Tito_Scwrl_2QHS.pdb
: