Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVSRLHCFVGYFDELLILLYLKLKWYYVIKYCYCCKFSEIDLIVSKKKELIFIEVKASLLGEDI--LISYLQYQSIVNSSKYFLSEKLSFLDYPIRYDLCFLSLTKRACLYKKCLA
3FOV Chain:A ((25-116))
-----------SAEASAADYLERQGYRILARRFKTRCGEIDLVAQRDALVAFVEVKAR------AYAVTPRQQSRIVAAAEAWLSRHPEHAMSELRFDAILIAPNTAPRHLPGAFD
General information:
TITO was launched using:
RESULT:
Template:
3FOV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70402 for 570 contacts (-123.5/contact) +
2D Compatibility (PS) -8743 + (NN) -287 + (LL) 1404
1D Compatibility (HY) 400 + (ID) 1000
Total energy: -78628.0 ( -137.94 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_3FOV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FOV-query.scw
PDB file :
Tito_Scwrl_3FOV.pdb
: