Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKSMDPIIGASSRILRSTPRKLNLVADLVRNKKVSFATVQLRFCEKKAAGLIGKVLNSAIANAQYNYGLDIDNLYIKEILIGKSFTLHRVCPKAMGRANRVSKHYSNITIKLRQIV
2J28 Chain:S ((5-105))---------AKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR-


General information:
TITO was launched using:
RESULT:

Template: 2J28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -48264 for 675 contacts (-71.5/contact) +
2D Compatibility (PS) -10300 + (NN) 1040 + (LL) 536
1D Compatibility (HY) -5200 + (ID) 2450
Total energy: -64638.0 ( -95.76 by residue)
QMean score : 0.320

(partial model without unconserved sides chains):
PDB file : Tito_2J28.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J28-query.scw
PDB file : Tito_Scwrl_2J28.pdb: